Sphingomonas sp. R1: OIM94_19605
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Entry
OIM94_19605 CDS
T11062
Name
(GenBank) TolC family protein
KO
K15725
outer membrane protein, heavy metal efflux system
Organism
sprr Sphingomonas sp. R1
Brite
KEGG Orthology (KO) [BR:
sprr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprr02000
]
OIM94_19605
Transporters [BR:
sprr02000
]
Other transporters
Pores ion channels [TC:
1
]
OIM94_19605
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UYY79661
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All DBs
Position
pR1b:39298..40575
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AA seq
425 aa
AA seq
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MHRILAAMLAAASCATMAQAQVGPSAPFAQDAPVYTLDQAVSAAGGSAPAAEAATTAVDA
ARAGRTVAGLRPNPVFQGQVENVIGSGPYRGVRSAESTVGFAIPIELGGKRGARVAVANA
QLSRAEIQAAIIAADVRLQVTQLYVEAVAADRRVTTARDQARIASDALRAASVRVQAGRA
SPLEQQRADVARINADANVERQLRLAEAARANLARRIGRPIDGALDDTLLDRLPGANIYG
PVAPVEATGTLALAAANADFSIAEAGVRLARANRVPDLNVGPAIRRLEATNDMAAVFTVS
IPIPVFNNGRAAIAQATAQRTQADAQRRVTALDIEQAITDAQAQAANAATTARAASGPAL
AAAQEAARIARIGYREGKFGQLELLDAERTLAETRVAAIDALAKYQNARAQVERLTAPAP
NGRNQ
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtatcctcgcggccatgctggccgcagcgtcgtgcgccactatggcgcaggcg
caggtcggaccatccgcgccttttgcgcaggacgcgccggtctacacacttgaccaagcg
gtcagtgcagcgggcggttcggcccctgctgccgaagcggcgacaactgcggtcgatgcg
gcccgtgcgggccgcacggtcgccggactgcggcccaacccggttttccaaggccaggtt
gagaatgtcatcggctcggggccgtatcgtggggtccgcagcgcggaatccacggtcggc
tttgcgatcccgatcgagctaggcggcaagcgcggcgcccgcgtcgcggtcgccaatgcg
caattgtcccgggccgaaatccaggccgcgatcatcgcggcagatgtccggcttcaggtg
acgcagctttatgtcgaggcggtcgcggccgatcgccgggttacaacagcccgcgaccag
gcccggatcgccagcgacgcgctgcgggccgcgagcgttcgcgtgcaggcggggcgggcc
tccccgctcgagcaacagcgcgcagatgtcgcgcgcatcaatgccgacgccaatgtggag
cggcagcttcgcttggcggaggcggcgcgggccaatctggcgcgccggatcggtcgaccg
attgacggtgcgctcgatgacacgctgctcgatcgcctgccgggggcgaacatctatgga
ccggtggcaccggtcgaggcgaccggcacgctcgcgctggcggcggcgaacgcggatttc
tcgatcgcggaagcgggcgttcggcttgctcgcgccaatcgcgtccctgacctcaatgtc
gggcctgcgatccgccgactggaagcgaccaatgacatggcggcggtgttcaccgtgtcg
atcccgatcccagtgttcaataatggtcgcgcggcgatcgcgcaggcgaccgcgcagcgg
acgcaggcggatgcacaacgtcgcgtgaccgcgctcgacatcgaacaggcgatcacggac
gcgcaggcgcaggcggccaatgccgcaacgacggctcgtgcggcgtcggggccagcgctg
gcggctgcacaggaggcggcccgcatcgcgcggatcggttatcgcgagggcaagttcggc
cagctcgaactgctcgatgcggaacgcacactcgctgaaacgcgggtcgccgcgatcgat
gcgctcgccaagtaccagaatgcccgcgcgcaagtggagcgactgaccgctcctgcgccg
aatgggagaaatcagtga
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