KEGG   Sphingobium sp. RSMS: EGM87_00175
Entry
EGM87_00175       CDS       T10811                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
sprs  Sphingobium sp. RSMS
Pathway
sprs03020  RNA polymerase
Brite
Enzymes [BR:sprs01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     EGM87_00175 (rpoC)
Transcription machinery [BR:sprs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     EGM87_00175 (rpoC)
DNA repair and recombination proteins [BR:sprs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      EGM87_00175 (rpoC)
SSDB
Other DBs
NCBI-ProteinID: UXC90948
LinkDB
Position
1:complement(35113..39369)
AA seq 1418 aa
MNELTNFANPIQKPETFDQIQIGLASPERIRSWSFGEIKKPETINYRTFKPERDGLFCAR
IFGPIKDYECLCGKYKRMKYKGIVCEKCGVEVTVSKVRRERMGHIELAAPVAHIWFLKSL
PSRIGLLLDMQLKQLERVLYFESYIVTEPGLTPLEKYQLLTEDELLDAQDEYGEDAFSAG
IGAEAVKQMLMDLDLEGEKQALLDELAVTKSELKPKKIIKRLKVVESFLESGNRPEWMIL
DVVPVIPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIVRNEKRML
QEAVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTGP
ELKLHQCGLPKKMALELFKPFIYARLDAKGLSMTLKQAKKWVEKERKEVWDILDEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQLE
ARVLMMSTNNILSPANGKPIIVPSQDMVLGIYYLSMEREGEPGEGMLLADMQEVHQALYA
KAVTLHSKIISRVPQTDEAGNQYMKRFETTPGRMLLGECLPKSHKVPFDVVNRLLTKKEI
GDVIDQVYRHTGQKDTVLFADAIMALGFRHAFQAGISFGKDDMVIPDSKTAMVDETKALV
ADYEQQYQDGLITQQEKYNKVIDAWSRCGDQVANAMMDEIRAQPKDPNTGRMAPINSIYM
MAHSGARGSQAQMKQLAGMRGLMAKPSGEIIETPIISNFKEGLTVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVSQDCTVVEEDCGTDKALEMKAIVQGGSVIASLGERILGRTT
AQDIVDSKDGSVIVPIGTLLDEALVAQIEAIGTQAVKIRSPLICESKMGVCGKCYGRDLA
RGTPVNIGEAVGVIAAQSIGEPGTQLTMRTFHIGGAANFNETSNLEAMSDGTIELRDMPT
ITDKNGRRLSLARNGEIAIIDSEGRERETHRLPYGATILFADGDTVKKGDRFAEWDPFTM
PVITEKPGIVKYQDLIDGKTLTEQTDEATGIAQRVVTEHRGSARTKEDLRPRLTLLDDQS
GEAARYMLAVGATLSVDDGAQVQAGDVLARVSREAAKTRDITGGLPRVAELFEARKPKDN
AIIAKVSGRVQFLKDYKAKRKIAINPEDGGEPVEYLIPKSKVIDVQEGDYVKRGDNLIGG
SPDPHDILEVLGIEPLAEYLVAEIQEVYRLQGVKINDKHIETIVRQMLQKVEITVSGDTT
LLVGEQVDREEMEEINAKLQPGFQPAEGKPVLLGITKASLQTRSFISAASFQETTRVLTE
AAVQGKKDTLVGLKENVIVGRLIPAGTGAGMNRMRVAASSRDAAMRAALRASSQVDLIAP
KTAAEEHAAELRQGPEAAIGDDPLAAVQGEDFTTEDME
NT seq 4257 nt   +upstreamnt  +downstreamnt
atgaacgaactgacgaacttcgccaatccgatccagaagccggaaaccttcgaccagatc
cagatcggccttgcctctccggagcgcatccgcagctggtccttcggcgagatcaagaag
ccggaaaccatcaactaccgcacgttcaagccggaacgtgacggcctgttctgcgcccgc
atcttcggtccgatcaaggactatgaatgcctgtgcggcaagtacaagcgcatgaagtac
aagggcatcgtgtgcgagaagtgcggcgtcgaggtcacggtgtcgaaggtccgccgcgag
cggatgggccatatcgaactggccgcgcccgtcgcgcacatctggttcctgaagtcgctg
ccctcgcgcatcggcctgctgctcgacatgcagctcaagcagcttgagcgcgtcctgtat
ttcgaaagctacatcgtcaccgagccgggcctgaccccgctggagaagtatcagctcctg
accgaggacgaactgctcgacgcgcaggacgaatatggcgaagacgccttctccgccggc
atcggcgcggaagcggtcaagcagatgctgatggacctcgaccttgagggcgagaagcag
gcgctgctggacgaactggccgtcaccaagtcggaactgaagcccaagaagatcatcaag
cggctgaaggtcgtcgagtccttcctggagtcgggcaaccggccggagtggatgatcctg
gacgtcgtgccggtcatcccgccggaactgcgcccgcttgttcccctggacggcggccgc
ttcgcgacctcggacctgaacgacctctatcgccgcgtcatcaaccgcaacaaccgcctg
aagcggctgatggaactgcgcgcgccggacatcatcgtccgcaacgaaaagcgcatgctg
caggaggccgtcgacgccctgttcgacaatggccgccgcggccgcgtcatcaccggcgcg
aacaagcgtccgctgaagtcgctgtccgacatgctgaagggcaagcagggccgcttccgt
cagaacctgctcggcaagcgcgtcgactattcgggccgctcggtcatcgtgaccggcccg
gaactcaagctgcaccagtgcggcctgcccaagaagatggcgctcgaactgttcaagccc
ttcatctacgcccgcctcgacgccaagggtctctccatgaccctgaagcaggccaagaag
tgggtcgagaaggagcgcaaggaagtctgggacattctcgacgaggtgatccgcgagcac
ccggtcatgctgaaccgcgcgccgacgctccaccgcctcggcattcaggcgttcgaaccc
gtgctgatcgagggcaaggcgatccagcttcacccgctggtttgctcggccttcaacgcc
gacttcgacggcgaccagatggccgtccacgtgccgctttcgctggaagcccagcttgaa
gcccgcgtgctgatgatgtcgaccaacaacatcctcagccccgcgaacggcaagccgatc
atcgtcccctcgcaggacatggtgctgggcatctattacctgtcgatggaacgcgaaggc
gagccgggagaaggcatgctgctggccgacatgcaggaggtccatcaggccctctatgcc
aaggccgtcaccctgcactcgaagatcatcagccgcgtgccgcagaccgacgaagccggc
aatcagtatatgaagcgcttcgagaccacgccgggccgcatgctgctgggcgaatgcctg
cccaagtcgcacaaggtgcccttcgacgtcgtcaaccgccttctcaccaagaaggaaatc
ggggacgtcatcgaccaggtctatcgccacaccggccagaaggacacggtgctgttcgcc
gacgccatcatggcgctgggcttccgccacgcgttccaggcgggcatcagcttcggcaag
gacgacatggtgatcccggattcgaagaccgcaatggtcgacgaaaccaaggcgctggtg
gccgactatgagcagcaatatcaggacggtctgatcacccagcaggaaaagtacaacaag
gtgatcgacgcctggagccgttgcggcgaccaggtcgcgaacgccatgatggacgaaatc
cgcgcccagcccaaggacccgaatacgggccgcatggcgccgatcaactccatctacatg
atggcgcattccggcgcccgtggttcgcaggcgcagatgaagcagcttgccggcatgcgc
ggcctgatggccaagccgtcgggtgagatcatcgaaacgccgatcatctcgaacttcaag
gaaggcctcaccgtccttgaatatttcaactccacccacggcgcccgcaagggtctggcc
gacaccgcgctcaagacggcgaactcgggttacctgacccgccgtctggtcgacgtcagc
caggactgcaccgtcgtcgaggaggattgcggcaccgacaaggcgctggagatgaaggcc
atcgtgcagggcggctcggtcatcgcctcgctcggcgaacgaatcctgggccgcaccacg
gcgcaggacatcgtcgacagcaaggacggttcggtcatcgtgccgatcggcacgctgctc
gacgaagcgctggtcgcgcagatcgaggccatcggcacgcaggccgtgaagatccgcagc
ccgctgatctgcgaaagcaagatgggcgtctgtggcaagtgctacggccgtgacctcgcc
cgtggtacgccggtcaatatcggtgaagcggtcggcgtcatcgcggcgcagtccatcggt
gaaccgggcacgcagctcaccatgcggaccttccacatcggcggcgcggcgaacttcaac
gaaacgtcgaacctggaagccatgtcggacggcacgatcgagctgcgcgacatgccgacc
atcaccgacaagaatggccgccgcctcagcctcgcccgcaatggcgagatcgcgatcatc
gacagcgagggccgcgagcgcgaaacgcaccgcctgccttacggcgccaccatcctgttc
gcggatggcgacaccgtgaagaagggtgatcgcttcgccgagtgggaccccttcaccatg
ccggtgatcaccgaaaagccgggcatcgtgaagtatcaggacctgatcgacggcaagacg
ctgaccgaacagaccgacgaagcgaccggcatcgcgcagcgcgtcgtgaccgagcatcgt
gggtccgcccgcaccaaggaagaccttcgcccgcgcctcaccctgctcgacgaccagtcg
ggcgaagccgcacgctacatgctggcggtgggtgcgaccctgtcggtggacgacggcgcg
caggtgcaggccggtgacgtgctggcgcgtgtcagccgcgaagcggccaagacccgcgac
atcaccggcggtctgccgcgcgtcgccgaactgttcgaagcccgcaagcccaaggacaat
gccatcattgccaaggtgtcgggccgcgtccagttcctcaaggattacaaggcgaagcgc
aagatcgccatcaatccggaggatggcggcgagccggtcgaatatctgatccccaagagc
aaggtgatcgacgttcaggaaggcgactatgtgaagcgcggcgacaacctgatcggtggt
tcgcccgacccgcacgacatattggaagtgctgggcatcgagccgctggccgaatatctg
gttgccgaaatccaggaagtctatcgactgcagggcgtgaagatcaacgacaagcacatc
gaaacgatcgttcgtcagatgctgcaaaaggtcgagatcaccgtgtccggcgacaccacg
ctgctggtgggcgagcaggtcgaccgcgaggagatggaggagatcaacgccaagctccag
cccggcttccagccggcagagggcaagccggtgctgctcggcatcaccaaggcgtcgctc
cagacgcgcagcttcatctcggcggcctccttccaggaaaccacccgcgtcctcacggaa
gcggcggtccagggcaagaaggacacgctggtcgggctcaaggagaatgtcatcgtcggc
cgcctgatcccggcgggcaccggcgccggcatgaaccgcatgcgcgtcgccgcctcgtcg
cgtgacgcggcgatgcgggcggcgctgcgggcctccagccaggtcgacctgatcgcgccc
aagacggctgccgaagagcatgccgccgaactgcgccagggtccggaagccgccatcggc
gacgatccgctggccgccgtccagggtgaggatttcaccaccgaggacatggaataa

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