Sphingobium sp. RSMS: EGM87_00320
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Entry
EGM87_00320 CDS
T10811
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sprs Sphingobium sp. RSMS
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprs03400
]
EGM87_00320 (radA)
DNA repair and recombination proteins [BR:
sprs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EGM87_00320 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
Lon_C
AAA_16
DnaB_C
AAA_22
RecA_N
nSTAND_NTPase5
AAA
AAA_30
NACHT
Glyco_hydro2_C5
NTPase_1
nSTAND3
AAA_5
Rad51
MeaB
AAA_24
SLFN-g3_helicase
AAA_29
AAA_14
NPHP3_N
ATPase_2
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
UXC90976
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Position
1:74754..76121
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AA seq
455 aa
AA seq
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MAKAKRKFVCQQCGTVSGRWQGQCDDCGEWNSIVEEAAETVFSARHDLHSGGRALTLVGL
DDKVELPPRTTTGIAEFDRALGGGIVSGSATLIGGDPGIGKSTLLLQAAARIASAGHSVA
YISGEEASDQVRLRAQRLGLGNAPVQLASATSVRDILTTLGEGAPPALLIIDSIQTMHSD
LIEGAPGTVSQVRASSQELIRFAKQRGTALILVGHVTKDGSIAGPRVLEHMVDTVLSFEG
ERSHQYRILRAIKNRFGGTDEIGVFAMVAEGLEEVANPSALFLTHRDENVTGATVFPALE
GTRPVLVEIQALVVRLSSGATPRRAVVGWDSGRLAMVLAVLEARCGLSFSTCEVYLNVAG
GYRLSDPAADLAVAAALMSALSERPVPADVVLFGEIALSGEIRPVAHAPLRLREAAKLGF
NRAFVPAAVADGVKGISVSGYRALAQLVDQMLGRG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggcaaagcgaaaattcgtctgtcagcaatgcggcaccgtttcgggccggtgg
caggggcagtgcgacgattgcggcgaatggaacagcattgtcgaggaagcggccgagacg
gtcttttccgcccgccacgacctgcatagcggcggcagggcgctgacgctggtggggctg
gacgacaaggtcgaactgccgccccgcaccaccaccggcattgcggagttcgatcgggcg
ctgggcggcggcatcgtgtccggttccgccacgctgatcggcggcgatccgggcataggc
aagtcgaccctgctgttgcaggcggccgcgcgcattgcttcggccgggcacagcgtcgcc
tatatcagcggcgaggaagcgtcggatcaggtgcgcctgcgcgcgcagcggctggggctt
ggcaatgcgcccgtgcagcttgccagcgccacttccgtgcgcgacatactgacgacgctg
ggggagggcgcgccgcccgcgctgctgatcatcgattcgatccagacgatgcacagcgac
ctgatcgagggcgcgcccggcacggtgagccaggtgcgcgcgtccagccaggaactgatc
cgcttcgccaagcagcgcggcaccgccctgatccttgtcggtcatgtgaccaaggacggc
agcatcgcgggcccccgcgtgctggagcatatggtcgatacggtgctgagcttcgaggga
gagcgcagccaccaatatcgcatcctgcgcgcgatcaagaaccgcttcggcggcacggac
gagatcggcgtgttcgcgatggtggccgaggggctggaggaggtcgccaatccgtccgcc
ctgttcctgacccatcgcgacgagaatgtgaccggcgccaccgtctttccggcgctggaa
gggacgcgcccggtgctggtggagatccaggcgctggtcgtccgcctttcgagcggggcc
acgccccgccgggctgtcgtgggttgggacagcgggcggctggccatggtgctggccgtg
ctggaggcgcgctgcggcctcagcttttcgacctgcgaagtctatctgaacgtcgcgggc
ggctatcgcctgtcggacccggcggccgacctggctgtcgcggccgcgctgatgtcggcg
ctgtcggaacggccggtgcccgccgatgtcgtcctgttcggggaaatcgccttgtccggc
gaaatccgcccggtggcccatgccccgttgcggttgcgcgaggcggccaagctcggtttc
aaccgcgctttcgttcccgccgccgtggccgatggggtcaagggcatttcggtcagcggt
tatcgcgcccttgcgcaacttgttgaccagatgctcggccgcggatag
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