Sphingobium sp. RSMS: EGM87_01065
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Entry
EGM87_01065 CDS
T10811
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EGM87_01065
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sprs01007
]
EGM87_01065
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprs03016
]
EGM87_01065
Enzymes [BR:
sprs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
EGM87_01065
Amino acid related enzymes [BR:
sprs01007
]
Aminoacyl-tRNA synthetase
Class I (U)
EGM87_01065
Transfer RNA biogenesis [BR:
sprs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EGM87_01065
Prokaryotic type
EGM87_01065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1e
tRNA-synt_1b
tRNA-synt_1_2
tRNA-synt_1f
Motif
Other DBs
NCBI-ProteinID:
UXC91113
LinkDB
All DBs
Position
1:234381..237104
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AA seq
907 aa
AA seq
DB search
MTELPKTFDPAEIESRWYAHWEEKGLFRPERPDAEPFTIVNPPPNVTGSLHIGHALDNTL
QDIAIRYERLRGKDALWVVGTDHAGIATQMVVERQMEARQDKRTNYTREQFIEKVWEWKA
ESGGAITRQLRRLGCSMDWANERFTMDEGFSKAVIKVFVELHRRGLLYRDKRLVNWDPRF
RSAISDLEVETQEVKGGFWHFRYPLADGVRLANGADHIVVATTRPETMLADMAVAVHPED
PRYRDVIGKDILQPITGRRFKIVADEHADPELGSGAVKITPGHDFNDFEVGKRAGFRPAE
MLNMFDADANVVQTADGLIPERFLGLHRFRNDGVDGARELVVAEMKALGLLVPHVTRNKE
GEEVVTDAEPRTIQTPFGDRSGVVIEPWLTDQWYVDAQKLAVAPMQAVRDGRIEIVPKTW
EKTFFNWMENIQPWCVSRQLWWGHRIPAWYDEDGNPYVAESEEEAQALAGNKRLTRDPDV
LDTWFSSALWPFGTLGWPEETETLKRHYPNDLLISGFDILFFWDARMAMMGMEFMGPERS
DPREKVPWRKLYLHGLVRAADGQKMSKSKGNVVDPLGLIDRFGADALRFFMAAMESQGRD
VKMDEKRVEGYRNFATKLWNAARFLQSNGVTASTSHEAPHAEAPVNRWIVAETVATVQAI
DTAMAELRFDAAANAIYHFIWDQFCDWYIELTKGSMDEETRAVAGWAFDQILVMLHPFMP
FITEELWNLTGTREGELIVARWPQALYAVDGEAQAEIDWLIRLIGAMRTARTELNVPPGA
KLGVVVHDASEETRRRIDRQGAALARLGRVESLSFGDSVTGGAAQIVVDEATFILPLEGV
IDIAAEKARLAKALAAAEKERDSLSARLSNPSFVEKAKPEAVAKAREDHGEKAAEAERLK
AALERLA
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactgcccaagaccttcgaccccgccgaaatcgaatcccgctggtacgcccat
tgggaggagaaggggctgttccgcccggaacgacccgacgcagagcccttcaccatcgtc
aacccgccgccgaacgtgacgggcagcctgcatatcggccatgcgctcgacaacacgttg
caggacatcgcgatccgctacgaacggttgcgcggcaaggatgcgctgtgggtggtgggc
accgaccatgccggcatcgcgacgcagatggtggtcgagcggcagatggaggcgcggcag
gacaagcgcaccaactacacgcgcgagcagttcatcgagaaggtgtgggagtggaaggcg
gagagcggcggcgcgatcacgcgccagcttcgccgcctgggatgctccatggactgggcg
aatgagcgcttcaccatggatgagggcttttccaaggccgtcatcaaggtgttcgtggaa
ctgcaccgccgtgggctgctctatcgcgacaagaggctggtgaactgggacccgcgcttc
cgctcggccatttccgatctggaggtcgagacgcaggaggtgaagggcggcttctggcat
ttccgctatccgctggccgatggcgttcgccttgccaatggcgcggaccatatcgtcgtg
gcgaccacgcgtccggaaacgatgctggccgacatggcggtcgccgttcatcccgaagac
ccgcgctaccgggatgtgatcggcaaggacatcctccagccgatcactggccgccgcttc
aagatcgtcgctgacgagcatgccgatccggaactgggatcgggtgcggtcaagatcacg
cccggacatgatttcaacgatttcgaagtgggcaagcgggcgggtttcaggccggccgaa
atgctcaacatgttcgatgccgacgccaatgtcgtccagaccgccgacgggctgatcccg
gaacggttcctgggcctgcaccgcttccgcaacgacggcgtggacggggcgcgggaactg
gtggtggcggagatgaaggcgcttggcctgctggttccgcatgtcaccaggaacaaggag
ggtgaggaggtcgtcaccgacgccgagccacgcaccatccagacgccctttggcgaccgg
tccggcgtcgtgatcgagccctggctgaccgaccaatggtatgtcgatgcgcagaagctc
gccgtcgcgccgatgcaggcggtgcgcgacgggcggatcgagatcgtgccgaagacctgg
gaaaagaccttcttcaactggatggagaacatccagccctggtgcgtgtcgcgccagctc
tggtgggggcatcggattcccgcctggtatgacgaggacggcaatccctatgtcgcggaa
agcgaagaggaagcgcaggctcttgccggcaataaaaggctgacccgcgaccccgatgtg
ctggacacctggttctcctccgcgctttggcccttcggcacgctaggatggccggaagag
acagagacgctcaagcgccactatcccaacgacctgctgatctccggcttcgacatcctg
ttcttctgggatgcgcgcatggctatgatggggatggagttcatgggtccggagcggagc
gatccgcgagagaaggtgccgtggcgcaagctctacctccacggactggtgcgcgccgcg
gacggacagaaaatgtccaagtccaagggcaatgtggtcgacccgctgggtttgatcgac
cggttcggcgcggatgcgctgcgcttcttcatggcggcgatggaaagccagggccgcgac
gtgaagatggatgagaagcgcgtcgagggctatcgcaacttcgcgaccaagctgtggaac
gcggcccgtttcctgcaatcgaacggcgtcacggcctcgaccagccatgaggcgccccat
gcggaggcgccggtcaatcgctggatcgtcgcggaaacggtggcgaccgtgcaggcgatc
gacaccgccatggccgaactgcgcttcgatgctgcggccaacgccatctatcacttcata
tgggaccagttttgcgactggtatatcgagctgaccaaaggctccatggatgaagaaaca
agggcggtggccggctgggcgttcgaccagatattggtgatgctgcatcccttcatgccc
ttcattaccgaagagttatggaatctgaccggaacgcgggaaggcgaactgatcgtcgcg
cgctggccgcaggcgctctatgccgtcgacggcgaggcgcaggcggagatcgactggctg
atccgcctgatcggcgcgatgcggacggcgcgcaccgaactcaacgtgccgccgggcgcg
aagctgggcgtcgtcgtgcatgatgcgtcggaggaaacccgccgccgcatcgaccgccag
ggggccgcattggcgcgcctgggccgggtggaaagcctgtccttcggcgacagcgtcacg
ggcggcgcggcgcagatcgtggtggacgaggcgacattcatcctgccgctggagggcgtg
atcgacatcgccgccgaaaaggcgcggctcgccaaggcgctggcggcggcggagaaggaa
cgggattcgctgtccgcgcgtctttccaatcccagcttcgtcgagaaggccaagcccgag
gccgtcgccaaggcgcgggaggaccatggcgaaaaggcggccgaggcggaaagattgaag
gcggcgctggaacggctcgcctga
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