KEGG   Sphingobium sp. RSMS: EGM87_01385
Entry
EGM87_01385       CDS       T10811                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sprs  Sphingobium sp. RSMS
Pathway
sprs00010  Glycolysis / Gluconeogenesis
sprs00020  Citrate cycle (TCA cycle)
sprs00260  Glycine, serine and threonine metabolism
sprs00280  Valine, leucine and isoleucine degradation
sprs00310  Lysine degradation
sprs00380  Tryptophan metabolism
sprs00620  Pyruvate metabolism
sprs00630  Glyoxylate and dicarboxylate metabolism
sprs00640  Propanoate metabolism
sprs00670  One carbon pool by folate
sprs00785  Lipoic acid metabolism
sprs01100  Metabolic pathways
sprs01110  Biosynthesis of secondary metabolites
sprs01120  Microbial metabolism in diverse environments
sprs01200  Carbon metabolism
sprs01210  2-Oxocarboxylic acid metabolism
sprs01240  Biosynthesis of cofactors
Module
sprs_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sprs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sprs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sprs_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sprs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EGM87_01385 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EGM87_01385 (lpdA)
   00620 Pyruvate metabolism
    EGM87_01385 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EGM87_01385 (lpdA)
   00640 Propanoate metabolism
    EGM87_01385 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EGM87_01385 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EGM87_01385 (lpdA)
   00310 Lysine degradation
    EGM87_01385 (lpdA)
   00380 Tryptophan metabolism
    EGM87_01385 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EGM87_01385 (lpdA)
   00670 One carbon pool by folate
    EGM87_01385 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sprs04147]
    EGM87_01385 (lpdA)
Enzymes [BR:sprs01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EGM87_01385 (lpdA)
Exosome [BR:sprs04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EGM87_01385 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored GIDA Pyr_redox_3 FAD_binding_2 NAD_binding_8 AlaDh_PNT_C HI0933_like Thi4 FAD_binding_3 Lys_Orn_oxgnase 3HCDH_N DAO
Other DBs
NCBI-ProteinID: UXC91170
LinkDB
Position
1:302136..303536
AA seq 466 aa
MADFDYDVLVIGAGPGGYVAAIRAAQLGLKTACAESRETLGGTCLNVGCIPSKALLHASE
LYEEAANGALAKLGVKIDKMSLDLDTMQGQRKEAVKGLTGGIEYLFKKNKVDWLKGLATF
AGANTVEVAGKTVTAKNIVIATGSSVTPLPGVAVDNAGGRIVDSTGALELDKVPGHLVVV
GGGVIGLELGSVWRRVGAKVTVVEFLDQILPGMDGEVRKEANKIFKKQGFEYKLGTKVTG
AEVGKKGVTLTVEPAAGGEAEKIEADVVLVSIGRRPNTEGLGLDKIGLELNARGQIETDH
DFATKVPGVWAIGDVIPGPMLAHKAEDEGIAVAENIAGLTGIVNHDVIPSVVYTKPEIAG
VGLTEEAAKEKGAIKVGKFPMLANSRAKTNHEPDGFVKIIADAETDKVLGVWIIATVAGT
MIAQAAQAMEFGASSEDIAYTCHAHPTHSEAIKEAAMAVTGKPIHI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggcagacttcgattatgatgttctggtgattggcgccggtcccggtggttatgtcgcg
gcgatccgcgcggctcagctcggcctcaagaccgcctgcgccgaaagccgcgagacgctg
ggcggcacctgcctcaatgtcggttgcattccgtccaaggcgctgctgcacgcttcggaa
ctgtatgaggaagccgccaatggcgcgctcgccaagctgggcgtgaagatcgacaagatg
agcctcgatctcgacaccatgcagggccagcgcaaggaagcggtgaagggcctgaccggc
ggcatcgaatatctgttcaagaagaacaaggtcgactggttgaagggtctggcgaccttc
gccggcgccaacaccgttgaagtcgcgggcaagacggtgacggcgaagaacatcgtcatc
gccaccggctcgtcggtcacgccgcttccgggcgttgcggtcgacaatgcggggggcagg
atcgtcgattcgaccggcgcgctggagctggacaaggttcccggccatctggtcgtcgtt
ggcggcggggtcatcgggctggaactgggttccgtatggcgtcgcgtcggtgcgaaggtc
acggtggtcgagttcctcgaccagatcctgcccggcatggacggcgaagtccgcaaggaa
gccaacaagatcttcaagaagcagggcttcgaatataagctcggcaccaaggtcacgggc
gcggaagtcggcaagaagggcgtgaccctgaccgtcgagccggccgccggcggcgaggcg
gagaagatcgaggccgatgtggtgctggtgtcgatcggccgtcgtccgaacacggagggg
ctgggtctcgacaagatcggtctggaactcaatgcccgtggccagatcgagaccgatcat
gacttcgcgaccaaggttcccggcgtctgggccattggcgatgtcatccccggcccgatg
ctcgcgcacaaggccgaggatgaaggcattgccgttgccgagaatatcgcgggcctgacc
gggatcgtgaaccatgacgtgatcccgtcggtggtctataccaagccggagatcgctggc
gtgggcctgacggaagaggccgccaaggaaaagggcgcgatcaaggtcggcaaattcccg
atgctggcgaacagccgcgccaagaccaaccatgagcccgatggcttcgtgaagatcatt
gccgatgcggaaaccgacaaggtgctgggcgtctggatcatcgcgacggttgcgggcacg
atgatcgcgcaggcggcgcaggcgatggagttcggcgcttcgagcgaggacattgcctat
acctgccacgcgcatccgacgcatagcgaggcgatcaaggaagcggccatggccgtgacg
ggcaagccgatccacatctga

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