Sphingobium sp. RSMS: EGM87_03475
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Entry
EGM87_03475 CDS
T10811
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGM87_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sprs03019
]
EGM87_03475
Enzymes [BR:
sprs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EGM87_03475
Messenger RNA biogenesis [BR:
sprs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EGM87_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
UXC91560
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All DBs
Position
1:complement(755702..756913)
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AA seq
403 aa
AA seq
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MTSLLPDADWRHRPGLDALLRALGAEQGLARFVGGAVRDGLLGLPVNDLDIATVLEPQSV
IDRLRAAGIKAVPTGIDHGTITAVINGWPVEITTLRRDVSTDGRRATIAYTDDWREDAAR
RDFTINALYADPLTHTITDFFGGVADLRAHRVRFIGEASARIAEDHLRILRYFRFLARFG
HDEPDVEAYAACRDAANSLMALSRERIADELLKLLALPGPLASLRLMVDGGILLPVLPEV
DHDGLTRLSMLIEREAASGTAPAALRRLAALLPPDPRAADQVGARLKLSNKARKRLTAAL
AGAATGATPRALAFRIGVEGAIDRILIDPSAPLDGLKMLADWAPPRLPLGGGALIARGLQ
PGPDVAKALAEVQDIWVAEDFPDAARVSEIADQTVSKFQRARQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcctgctgcctgacgccgactggcgccatcgccccggcctggacgcgctgctg
agggcgctcggcgcggaacagggcctcgcccgcttcgtcggcggcgccgttcgcgacggc
cttctgggcctgccggtcaacgacctggacatcgccaccgtgctggagccgcagtcggtc
atcgaccgcctcagggccgccgggataaaggccgtgcccaccggcatcgaccatggcacg
atcacggcggtgatcaacggctggccggtggagatcacgaccctccgccgcgacgtcagc
acggacggccgccgcgccaccatcgcctataccgacgactggcgcgaagacgccgcccgg
cgcgatttcacgatcaacgcgctctatgccgaccccctcacccacaccatcacggacttc
ttcggcggcgtcgccgatctccgcgcgcatcgcgtccgcttcatcggagaggcaagcgcc
cgcatcgcggaggatcatctccgcatcctgcgctatttccgtttcctcgcgcgcttcggc
catgacgaaccggatgtggaggcctatgccgcctgccgcgacgccgccaacagcctgatg
gccctttcgcgcgaacgcattgcggacgaactgctcaaactgctcgccctgcccgggccg
ctcgcctcgctccggctcatggtcgacggcggcatattgctgcccgtcctgccggaggtc
gaccatgacggactgacccgcctgtccatgctgatcgagcgggaggccgcctccggcacc
gcccctgcagccctgcgccgcctggcggccctgcttccgccggacccgcgcgccgccgat
caggtgggcgcccggctcaaattgtccaacaaggcccgcaagcgcctgaccgccgcgctg
gcaggcgccgccaccggcgcgaccccccgcgccctcgccttccggatcggcgtggaaggg
gccatcgaccgtatcctgatcgatccctcggctccgctcgacggcctgaagatgctcgcg
gactgggccccgccgcgcctgccgctgggcggcggcgccctgatcgcgcggggccttcag
cccggcccggacgtggcgaaggcgctggccgaggttcaggacatctgggtggcggaggat
tttcccgacgcagcccgcgtctcggaaatcgcggatcagaccgtttcgaaattccagcgc
gcccgccaatag
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