Sphingobium sp. RSMS: EGM87_03840
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Entry
EGM87_03840 CDS
T10811
Symbol
trmFO
Name
(GenBank) methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO
KO
K04094
methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase [EC:
2.1.1.74
]
Organism
sprs Sphingobium sp. RSMS
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprs03016
]
EGM87_03840 (trmFO)
03036 Chromosome and associated proteins [BR:
sprs03036
]
EGM87_03840 (trmFO)
Enzymes [BR:
sprs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.74 methylenetetrahydrofolate---tRNA-(uracil54-C5)-methyltransferase [NAD(P)H-oxidizing]
EGM87_03840 (trmFO)
Transfer RNA biogenesis [BR:
sprs03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
EGM87_03840 (trmFO)
Chromosome and associated proteins [BR:
sprs03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
EGM87_03840 (trmFO)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIDA
Pyr_redox_2
NAD_binding_8
DAO
FAD_oxidored
AlaDh_PNT_C
FAD_binding_3
Pyr_redox
FAD_binding_2
HI0933_like
Pyr_redox_3
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
UXC91628
LinkDB
All DBs
Position
1:complement(828061..829413)
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AA seq
450 aa
AA seq
DB search
MGKVAKHQVHIIGGGMAGTEAAWQLAQAGVKVRLSEMRGSGDMTPAHQTDGLAELVCSNS
FRSDDADKNAVGLLHQEMRRLGSLIMAQAEPAKVPAGSALAVDRHIFSEGVTRALAGHPN
VEIVRERIDALPSEGMTIVATGPLTAPALAASIGQAAGIDHLAFFDAIAPVVHFDSIDMD
KCWMANRWDKIGPGGGEGKDYINCPMNREQYQAFVQGLLDGEKSDFKEWEKDTPYFEGCM
PIEVMASRGPETLRHGPMKPMGLDDPRTGRWPYAVVQLRQDNASGTLWNMVGFQTKLKHG
AQVELFRTIPGLEKAEFARLGGLHRNTFIQSPKLLDGTLRLKSAPHIRFAGQVTGCEGYV
ESAAIGLLAGRFAAAEILGRPLAPLPPETALGALLGHVTGNVETADYQPMNVNFGLFPPL
DDVKKKQRKEAMTSRARAALGAWLGELQPA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagtggcgaagcatcaggttcacatcatcggcggcggcatggcaggcacggaa
gcggcatggcaattggcgcaggccggcgtgaaggtccgcctgtcggaaatgcgcgggagc
ggcgacatgacccccgcgcatcagaccgatggccttgccgaactggtctgctccaacagc
ttccgctccgacgatgcggacaagaatgccgtggggctgctgcatcaggagatgcggcgg
ctgggctccctcatcatggcgcaggcggaaccagccaaggttcccgccgggtcggcgctc
gcggtcgaccgccacatcttttccgaaggcgtcacccgggcactggccgggcatcccaat
gtggagatcgtgcgcgaacgcatcgacgccctgccgtcagagggcatgaccatcgtcgcc
accggcccgctgaccgcccctgctctggccgccagcatcgggcaggcggcgggcatcgac
catctcgcctttttcgacgccatcgcgccggtcgtgcatttcgacagcatcgacatggac
aaatgctggatggccaatcgctgggacaagatcggccccggcggcggcgaggggaaggac
tatatcaactgccccatgaacagggagcagtatcaggccttcgtccagggcctgctcgac
ggcgagaagagcgacttcaaggaatgggaaaaggacacgccctatttcgagggctgcatg
cccatcgaagtcatggcgtcgcgtggcccggaaacattgcgccacggaccgatgaagccg
atgggcctggacgatccgcgcaccggccgctggccctatgcggtggtgcaactgcggcag
gacaatgcgtcgggcacgctgtggaacatggtcggcttccagaccaagctgaagcatggc
gcgcaggtcgaactgttccgcaccatccccggtctggaaaaggcggaattcgcccggctg
ggcgggcttcaccgcaacaccttcatccagagccccaagctgctggacggcaccttgcgc
ctgaaaagcgccccgcatatccgctttgccggacaggtcacgggctgcgagggctatgtc
gagagcgcggccataggcctgctcgccgggcgctttgccgcggcggagatattgggccgg
ccgctcgcgccgctgccgccggaaaccgcgctcggcgcgctgctgggccatgtgaccggc
aatgtcgagacggcggattaccagccgatgaacgtcaatttcggcctcttccccccgctc
gacgacgtgaagaagaagcagcgcaaggaagccatgacatcccgcgcccgcgccgcgctg
ggcgcctggctgggcgaacttcagccggcctga
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