Sphingobium sp. RSMS: EGM87_04195
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Entry
EGM87_04195 CDS
T10811
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00260
Glycine, serine and threonine metabolism
sprs00460
Cyanoamino acid metabolism
sprs00630
Glyoxylate and dicarboxylate metabolism
sprs00670
One carbon pool by folate
sprs00680
Methane metabolism
sprs01100
Metabolic pathways
sprs01110
Biosynthesis of secondary metabolites
sprs01120
Microbial metabolism in diverse environments
sprs01200
Carbon metabolism
sprs01230
Biosynthesis of amino acids
sprs01240
Biosynthesis of cofactors
sprs04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EGM87_04195
09102 Energy metabolism
00680 Methane metabolism
EGM87_04195
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EGM87_04195
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EGM87_04195
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EGM87_04195
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EGM87_04195
Enzymes [BR:
sprs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EGM87_04195
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
UXC91691
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Position
1:complement(910650..911969)
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AA seq
439 aa
AA seq
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MSTATLTQPGLSDIRSEGYFTRSLADADPAVFAGVTRELKREQNQIELIASENIVSKAVL
EAQGSVFTNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKEIFNCGFVNVQPHSGAQANGA
VMLALTKPGDTIMGLSLDAGGHLTHGAKPALSGKWYNAVQYGVREDTHLIDYDALEAQAI
EAKPTLIIAGGSAYPRHLDFARFRAIADKVGALLMVDMAHFAGLVAGGAHPTPFGHAHVV
TTTTHKTLRGPRGGMILTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFR
TYAQAIVTNAKALASKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCN
KNGVPGDPLPPTKTSGIRVGSPAGTTRGFGVAEFEAIGDMIADVLEGLRDHGEHGDAAVE
ANVRDRVSALCARFPIYEG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgctaccctcacccagcccggcctgtcggacatccgctccgaaggctatttc
acgcgcagcctggccgatgccgatccggcggtgttcgcgggcgtcaccagggaattgaag
cgcgagcagaaccagatcgagctgatcgcttcggaaaatatcgtatccaaggcggtgctg
gaggcgcagggttcggtcttcaccaacaaatatgccgaaggctatcccggcaagcgctat
tatcagggctgcgccccgtcggacgaggtcgagcagctggccatcgaccgcgcgaaggaa
atcttcaactgcggcttcgtcaatgtgcagccccattcgggcgcgcaggcgaacggcgcg
gtgatgctggcgctgaccaagccgggcgacaccatcatgggcctgtcactcgacgccggc
ggtcacctgacccatggcgcgaagcccgcgctgtcgggcaaatggtataatgccgtgcaa
tatggcgtgcgcgaggatacgcacctcatcgattatgacgcgctggaggcgcaggcgatc
gaagcaaagcccacgctgatcatcgcgggcggttcggcctatccccgccacctcgacttc
gcccgcttccgcgcgatcgcggacaaggtcggcgcgctgctgatggtggacatggcgcat
tttgccgggctggtggctggcggagcgcatccgacgccctttggccatgcccatgtcgtg
accaccaccacgcacaagaccctgcgcggtccgcggggcggcatgatcctgaccgatgac
gaggccattgcgaagaagatcaattcggcagtgttccccggccttcagggcgggccgctg
atgcatgtgatcgcggcgaaggcggttgccttcggcgaggcgctgcgtcctgaattcagg
acctatgcgcaggcgatcgtcaccaatgcaaaggcgctggcttcgaagctggagcagcgc
ggcctcgcggtggtttccggcggcaccgacacgcatctcgccctgatcgacctgcgcccc
tacggcatttcgggcaaggatgcggacgaggcgctggaacgcagcttcatcacctgcaac
aagaatggcgtgccgggcgatccgctgccgccgaccaagaccagcggtattcgggttggt
tcccctgcaggaacgacgcgcgggttcggcgttgcggagttcgaggccattggcgacatg
atcgcggatgttctggaggggctgcgcgatcatggcgagcatggcgacgcagccgtggaa
gccaatgtgcgcgaccgcgtctccgccctctgcgcccgtttcccgatctacgaagggtaa
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