Sphingobium sp. RSMS: EGM87_04740
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Entry
EGM87_04740 CDS
T10811
Name
(GenBank) DEAD/DEAH box helicase
Organism
sprs Sphingobium sp. RSMS
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Motif
Other DBs
NCBI-ProteinID:
UXC91786
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All DBs
Position
1:1020718..1023939
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AA seq
1073 aa
AA seq
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MIWGRKKAKPEVRQATTPSLVVEEGGILLPAGSEPTPRSKAAAALLDQLADEGLAERVDG
GHLLQWTQLFVLLEDEEAAAELEILQLPPSTMAVPKIVSRNSLTDRDFSVAIDGWFNADR
GPVSGARLRGGALEADAGLQLVSPRVWSLLERVRRFARRPEEERNEADQRRAWGEIRQLA
VAAGASLDDFLYRTVVLTPERLQMALRRSEGLGLVEVEPWFEGAPADWLEAFDRSGQVRD
RYDLPTPDGIIQVMISPEVSTVLREVKRMPGRRVAGERAEAFLLNPIAALGPDAAAVVDE
EQFEEAKQQAGIVFERFAAVTPETHGEGALGLLITSGAGEAIETREVMLEEADVIEFVAG
VERNLDRGLQLFAWDEYEFELDGDSRLHCEALRRALGHSEDGVITHGQVYDLSGYSERVE
GIGQEKSFYSPHIAKRDDGEGWFPENLVPMIGWTDPETDQPCILPLTDELSAELREGLET
AKATGATSVPLTGCPTPIPVREAEAIVSTFGQVRDQAAKGTFKPETPARRGKKPTLILKS
NIGQVDYREERLAALAEKPAPARLPSNLRPGVALKHHQLEGLAWMQHLLALAPDKCRGAL
LADDMGLGKTLQILSLVARAREENPETPPALVVAPLSLLENWKEESEKFLEPGTLKILTA
YGEGLTGLRVDRASVDEQLRREGLVRFLRPDWRGDADLVLTTYETLRDLEFSFAREKWSV
MVCDEAQKIKNPNAAMTRAAKKQQAQFRIACTGTPVENSLVDLWCLFDFVQPGLLGALNE
FGATYRRPIEAKSDDDRAKVEELRGVITPQLLRRMKAEVATDLKAKVVDESSRSLDMSPF
QRGLYVGAIDAFRRAGAAPGSHLALLHKLRLLCSDPDESAGSAYDPVDSYRARSPKLDWL
IEVLKAIRDRGEKAIVFCEFKAIQRLIKHYVQEEFGVPVKIINGDTTALASAIDSRQKMI
RSFQEQPGFGVIVLSPVAVGFGVNMQAANHVIHFTRTWNPAKEDQATDRAYRIGQTKDVF
VYYPSVSAGDFKTFDVKLDELLERKRSLASDMLNGSGEIGLGDFDVDELRPVE
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgatctggggtaggaagaaggccaagccggaagtccgtcaagcgaccacgccatcgcta
gtcgtcgaggagggaggcattctcctgcctgccggcagcgagccgaccccccggtcaaag
gccgcggcggcgcttctcgaccagctggccgacgaggggctcgcggagcgggtcgacggt
ggccaccttttgcagtggacgcagctattcgttctccttgaggacgaggaggcagcggcg
gagcttgaaatactccaactcccaccgtccacaatggcggttccgaagatcgtgagccga
aattcgctgacggatcgcgacttctcggtcgcgatcgacggttggttcaacgctgaccgc
ggccccgtatccggggcgaggcttaggggcggcgcgctcgaagcggacgccggcctccag
cttgtttctccgcgcgtttggagcttgctggaacgcgtccggagatttgcacgtcgtcca
gaggaagagcgcaacgaagccgaccagcgtcgcgcctggggagagatccgtcagttggcg
gttgcggctggcgcctcgcttgatgacttcctctaccggacggtggtgctcacgccggag
cgattgcagatggcactgcgtcgttcggaaggattggggctggttgaggtcgagccatgg
tttgagggcgcgccagccgactggcttgaagcgttcgacaggtcgggtcaggtgcgtgac
cgatacgatctgccgacgccggacggaatcattcaggtgatgatctcgcccgaggtgagc
acagtgctgcgcgaggtcaagcgcatgcctggtcgtcgtgtcgccggcgagcgtgccgag
gcttttctcctcaatccgatcgcagcgctgggaccggacgcggctgcggtcgtcgacgaa
gagcagttcgaggaagcgaagcagcaggcgggcatcgtgttcgaacggtttgccgccgtg
acgccggaaactcatggtgaaggtgccctcggcctgctcatcaccagtggggcaggcgag
gccatcgagacacgtgaggtcatgctcgaggaggccgacgtcatcgagttcgtcgccggc
gtcgagcgcaatcttgatcgcggccttcagctgttcgcctgggacgaatatgagttcgaa
ctagatggcgacagccggctgcactgcgaagcacttcgtcgggcgcttggccatagtgag
gacggcgtcatcacgcacggtcaggtctacgacctctcaggctactcggaacgcgtggag
ggcatcggccaggagaagtccttctattccccccacatcgccaagcgcgacgacggggag
ggctggttccctgaaaatctcgtcccgatgatcggatggacggatccggaaaccgaccaa
ccctgtatcctgccgctaacagacgagttgtcggccgagctgcgtgaggggctggagacc
gcgaaagcgaccggagcaacgtcagtccctctgacagggtgcccgacgcccatcccggtc
cgtgaggccgaggcgatcgtatccaccttcggacaggtcagggatcaagccgcgaaggga
acgttcaagcccgaaactcctgcgcgtcgcgggaagaagcccacactgatcctcaagagc
aacataggacaggtggactacagggaggagcggcttgcggcgctcgcggagaagccggct
cctgccaggcttccctccaatctccgtcctggcgtcgcgctgaagcaccaccagctcgaa
ggacttgcctggatgcagcatcttctagcgctggcgcccgacaagtgccggggcgctctg
ctggccgacgacatgggtcttgggaagacgcttcagatactcagcctcgtagcgcgggcg
cgggaggagaatcccgaaaccccgccggcgttggttgttgccccgctctcacttctggag
aactggaaggaggagtcggagaagttcctcgagcccgggacgctgaagatcctgacggct
tatggcgaaggcctcactggtctgcgcgtcgatcgggcctcggtcgatgagcagctccgc
agggaagggctggtgcggtttcttcgcccggactggcgcggcgatgcagacctcgtcctc
acgacctatgagacgctccgcgatcttgagttctcgttcgcgcgcgagaagtggtctgtg
atggtctgcgacgaagcgcagaagatcaagaacccgaacgccgcgatgacccgggccgcc
aagaagcagcaggcgcagttccgtattgcctgcacggggaccccggtcgagaacagcctg
gtcgatctttggtgtctgtttgacttcgtgcagcctggtctgctcggtgcgctcaacgag
ttcggtgcgacataccgtcgcccgattgaggcaaagagcgacgacgacagagcgaaggtc
gaggagctgcggggtgtcatcacgccccagctgctccgacgcatgaaggcagaagtcgct
accgacctgaaggcgaaggtcgtggacgagtccagccgcagtcttgatatgagcccgttc
cagcgcggcctttacgtcggcgcgatcgacgccttcaggcgggccggggcggcgccggga
agccatctggcactcctccacaagctcaggctgctgtgttcggacccggatgagagcgct
ggcagcgcctatgatccagtggatagctatcgggcacggtctccgaagctcgactggctg
atcgaggttctcaaggcgatccgtgatcgaggagagaaggcgatcgtcttctgcgagttc
aaggcgatccagcgcctgatcaagcattacgtgcaggaggagttcggcgttcccgtcaag
atcatcaatggcgacacgaccgcattggcgagcgccatcgatagccggcaaaagatgata
cgatccttccaggaacagccgggattcggtgtaattgtgctgtcgcccgtagctgttgga
ttcggcgtcaacatgcaggcggcgaaccatgtcatccacttcacaaggacctggaatcca
gcgaaagaggatcaggcgaccgaccgggcataccgcatcggccagacgaaggatgtgttc
gtttactatccctccgtgtctgcaggagacttcaagacgttcgacgtgaagctggacgag
cttctcgaacggaaacgctcgttggcgagcgacatgctcaacggcagcggtgagatcggc
ctcggcgacttcgacgtcgacgagctacgcccagttgaataa
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