Sphingobium sp. RSMS: EGM87_07495
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Entry
EGM87_07495 CDS
T10811
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00010
Glycolysis / Gluconeogenesis
sprs00020
Citrate cycle (TCA cycle)
sprs00260
Glycine, serine and threonine metabolism
sprs00280
Valine, leucine and isoleucine degradation
sprs00310
Lysine degradation
sprs00380
Tryptophan metabolism
sprs00620
Pyruvate metabolism
sprs00630
Glyoxylate and dicarboxylate metabolism
sprs00640
Propanoate metabolism
sprs00670
One carbon pool by folate
sprs00785
Lipoic acid metabolism
sprs01100
Metabolic pathways
sprs01110
Biosynthesis of secondary metabolites
sprs01120
Microbial metabolism in diverse environments
sprs01200
Carbon metabolism
sprs01210
2-Oxocarboxylic acid metabolism
sprs01240
Biosynthesis of cofactors
Module
sprs_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sprs_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sprs_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
sprs_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
EGM87_07495 (lpdA)
00020 Citrate cycle (TCA cycle)
EGM87_07495 (lpdA)
00620 Pyruvate metabolism
EGM87_07495 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
EGM87_07495 (lpdA)
00640 Propanoate metabolism
EGM87_07495 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EGM87_07495 (lpdA)
00280 Valine, leucine and isoleucine degradation
EGM87_07495 (lpdA)
00310 Lysine degradation
EGM87_07495 (lpdA)
00380 Tryptophan metabolism
EGM87_07495 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
EGM87_07495 (lpdA)
00670 One carbon pool by folate
EGM87_07495 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sprs04147
]
EGM87_07495 (lpdA)
Enzymes [BR:
sprs01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
EGM87_07495 (lpdA)
Exosome [BR:
sprs04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
EGM87_07495 (lpdA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
FAD_binding_2
GIDA
HI0933_like
NAD_binding_8
FAD_oxidored
FAD_binding_3
AlaDh_PNT_C
Lys_Orn_oxgnase
Thi4
2-Hacid_dh_C
3HCDH_N
GMC_oxred_N
UDPG_MGDP_dh_N
DFP
Motif
Other DBs
NCBI-ProteinID:
UXC92302
LinkDB
All DBs
Position
1:complement(1617381..1618778)
Genome browser
AA seq
465 aa
AA seq
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MAENYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEIY
HYMQHAGDYGLAADKISADIAAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGEGKLTGKG
RLSVTRDGKTEELTAKNIIVATGARARDLPGSPADGKRVWTYRHAMTPPEMPGKLLVIGS
GAIGIEFASFYNDMGADVTVVEMMDRIVPVEDADVSAFLEKALKKQGMTILTGAGVSDIQ
VGANGVKAKLKDKAGKESVAEFSHMIVAIGIVPNTENIGLKELGVAMDERGFLKTDAMCR
TNVDGLWAIGDITAPPWLAHKASHEGVIAAEAIAGKHPHAMDPRNIPGCTYCHPQIASVG
LTEAKAKEAGYEVKVGMFPFIGNGKAIALGEAEGFTKTVFDAKTGELLGAHMVGAEVTEM
IQGYTIGKTLETTEAELMHTVFPHPTISESMHESVLAAYGRALHI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaattacgacctcatcgttctgggctccggccccggcggctatgtggccgcg
atccgcgccgcccaactgggcctgaagaccgccattgtcgagcgggagaatctgggcggc
atctgcctcaactggggctgcattccgaccaaggcgttgctgcgttccgcggaaatctac
cattatatgcagcatgccggggactatggactggcggccgataagatcagcgccgacatc
gcggcggtggtgaagcgttcgcgcggcgtcgccaagcaactgaaccagggcgtcacgcac
ctgatgaagaagaacaagatcgccgttcatatgggcgagggcaagctgaccgggaagggc
aggctcagcgtcaccagggacggcaagacggaggaactgacggcgaagaacatcatcgtc
gccaccggtgcgcgggcgcgcgacctgccgggcagcccggccgacggcaagcgcgtctgg
acctatcgccacgccatgaccccgccggaaatgccgggcaagctgctggtcatcggatcg
ggcgcgatcggcatcgagttcgccagcttctacaatgacatgggcgccgacgtgaccgtg
gtcgagatgatggaccgcatcgtgccggtcgaggatgcggatgtttccgcctttctcgaa
aaggcgctgaagaagcagggcatgaccatcctgaccggtgccggcgtcagcgacatccag
gtcggcgccaatggcgtcaaggcgaagctgaaggacaaggcgggcaaggagagcgtcgcc
gaattcagccacatgatcgtcgccatcggcatcgtccccaatacggagaatatcggcctc
aaggaactgggcgtcgccatggacgagcgcggtttcctgaagaccgacgcgatgtgccgc
accaatgtcgacggcctctgggcgatcggtgacatcactgccccgccgtggctggcgcac
aaggcgagccatgagggcgtgatcgcggcggaagccattgccggcaagcatccccatgcc
atggacccgcgcaatattccgggctgcacctattgccatccgcagatcgcctccgttggc
ctgactgaagccaaggcgaaggaagccggctatgaggtgaaggtcggcatgttccccttc
atcggcaatggcaaggccatcgcgctgggcgaggcggaaggcttcaccaagacggtgttc
gatgccaagaccggcgagttgcttggcgcgcatatggtcggtgcggaagtgaccgagatg
atccagggctataccatcggcaagacgctggagacgaccgaggcggaactgatgcacacc
gtcttcccgcatccgaccatctcggaatcgatgcatgaaagcgtgctcgccgcttatggg
cgcgcactccatatctga
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