KEGG   Sphingobium sp. RSMS: EGM87_07495
Entry
EGM87_07495       CDS       T10811                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
sprs  Sphingobium sp. RSMS
Pathway
sprs00010  Glycolysis / Gluconeogenesis
sprs00020  Citrate cycle (TCA cycle)
sprs00260  Glycine, serine and threonine metabolism
sprs00280  Valine, leucine and isoleucine degradation
sprs00310  Lysine degradation
sprs00380  Tryptophan metabolism
sprs00620  Pyruvate metabolism
sprs00630  Glyoxylate and dicarboxylate metabolism
sprs00640  Propanoate metabolism
sprs00670  One carbon pool by folate
sprs00785  Lipoic acid metabolism
sprs01100  Metabolic pathways
sprs01110  Biosynthesis of secondary metabolites
sprs01120  Microbial metabolism in diverse environments
sprs01200  Carbon metabolism
sprs01210  2-Oxocarboxylic acid metabolism
sprs01240  Biosynthesis of cofactors
Module
sprs_M00009  Citrate cycle (TCA cycle, Krebs cycle)
sprs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sprs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
sprs_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:sprs00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EGM87_07495 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EGM87_07495 (lpdA)
   00620 Pyruvate metabolism
    EGM87_07495 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EGM87_07495 (lpdA)
   00640 Propanoate metabolism
    EGM87_07495 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EGM87_07495 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EGM87_07495 (lpdA)
   00310 Lysine degradation
    EGM87_07495 (lpdA)
   00380 Tryptophan metabolism
    EGM87_07495 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EGM87_07495 (lpdA)
   00670 One carbon pool by folate
    EGM87_07495 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sprs04147]
    EGM87_07495 (lpdA)
Enzymes [BR:sprs01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EGM87_07495 (lpdA)
Exosome [BR:sprs04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EGM87_07495 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 FAD_binding_2 GIDA HI0933_like NAD_binding_8 FAD_oxidored FAD_binding_3 AlaDh_PNT_C Lys_Orn_oxgnase Thi4 2-Hacid_dh_C 3HCDH_N GMC_oxred_N UDPG_MGDP_dh_N DFP
Other DBs
NCBI-ProteinID: UXC92302
LinkDB
Position
1:complement(1617381..1618778)
AA seq 465 aa
MAENYDLIVLGSGPGGYVAAIRAAQLGLKTAIVERENLGGICLNWGCIPTKALLRSAEIY
HYMQHAGDYGLAADKISADIAAVVKRSRGVAKQLNQGVTHLMKKNKIAVHMGEGKLTGKG
RLSVTRDGKTEELTAKNIIVATGARARDLPGSPADGKRVWTYRHAMTPPEMPGKLLVIGS
GAIGIEFASFYNDMGADVTVVEMMDRIVPVEDADVSAFLEKALKKQGMTILTGAGVSDIQ
VGANGVKAKLKDKAGKESVAEFSHMIVAIGIVPNTENIGLKELGVAMDERGFLKTDAMCR
TNVDGLWAIGDITAPPWLAHKASHEGVIAAEAIAGKHPHAMDPRNIPGCTYCHPQIASVG
LTEAKAKEAGYEVKVGMFPFIGNGKAIALGEAEGFTKTVFDAKTGELLGAHMVGAEVTEM
IQGYTIGKTLETTEAELMHTVFPHPTISESMHESVLAAYGRALHI
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggctgagaattacgacctcatcgttctgggctccggccccggcggctatgtggccgcg
atccgcgccgcccaactgggcctgaagaccgccattgtcgagcgggagaatctgggcggc
atctgcctcaactggggctgcattccgaccaaggcgttgctgcgttccgcggaaatctac
cattatatgcagcatgccggggactatggactggcggccgataagatcagcgccgacatc
gcggcggtggtgaagcgttcgcgcggcgtcgccaagcaactgaaccagggcgtcacgcac
ctgatgaagaagaacaagatcgccgttcatatgggcgagggcaagctgaccgggaagggc
aggctcagcgtcaccagggacggcaagacggaggaactgacggcgaagaacatcatcgtc
gccaccggtgcgcgggcgcgcgacctgccgggcagcccggccgacggcaagcgcgtctgg
acctatcgccacgccatgaccccgccggaaatgccgggcaagctgctggtcatcggatcg
ggcgcgatcggcatcgagttcgccagcttctacaatgacatgggcgccgacgtgaccgtg
gtcgagatgatggaccgcatcgtgccggtcgaggatgcggatgtttccgcctttctcgaa
aaggcgctgaagaagcagggcatgaccatcctgaccggtgccggcgtcagcgacatccag
gtcggcgccaatggcgtcaaggcgaagctgaaggacaaggcgggcaaggagagcgtcgcc
gaattcagccacatgatcgtcgccatcggcatcgtccccaatacggagaatatcggcctc
aaggaactgggcgtcgccatggacgagcgcggtttcctgaagaccgacgcgatgtgccgc
accaatgtcgacggcctctgggcgatcggtgacatcactgccccgccgtggctggcgcac
aaggcgagccatgagggcgtgatcgcggcggaagccattgccggcaagcatccccatgcc
atggacccgcgcaatattccgggctgcacctattgccatccgcagatcgcctccgttggc
ctgactgaagccaaggcgaaggaagccggctatgaggtgaaggtcggcatgttccccttc
atcggcaatggcaaggccatcgcgctgggcgaggcggaaggcttcaccaagacggtgttc
gatgccaagaccggcgagttgcttggcgcgcatatggtcggtgcggaagtgaccgagatg
atccagggctataccatcggcaagacgctggagacgaccgaggcggaactgatgcacacc
gtcttcccgcatccgaccatctcggaatcgatgcatgaaagcgtgctcgccgcttatggg
cgcgcactccatatctga

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