Sphingobium sp. RSMS: EGM87_08365
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Entry
EGM87_08365 CDS
T10811
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
sprs Sphingobium sp. RSMS
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sprs03000
]
EGM87_08365
Transcription factors [BR:
sprs03000
]
Prokaryotic type
Helix-turn-helix
LacI family
EGM87_08365
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_31
HTH_3
HTH_Tnp_ISL3
Exog_C
HTH_AraC
HNH_repeat
HTH_7
Motif
Other DBs
NCBI-ProteinID:
UXC92457
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Position
1:1782179..1783225
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AA seq
348 aa
AA seq
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MEPRSSRRQRNAPTINDVAKHAGVSPMTVSRVINGEQIVRSATKEKVEAAIAALNYSPSA
AARSLAGGDETRIGLLYSNPSASYLSEFLVGSLDQASRSGVDLVVEKWDEETAIDTVVDH
LLRGRINGVILPPPLCDHQAMKDALKAADIVAVAVATGEAPADMSAVSIDDHAAALAMTR
HLIALGHRRIGFIKGHPNQSASQRRFEGYGDALAEAGIEPDETLVEQGYFTYRSGLDAAE
RILALPEPPTAIFASNDDMAAAAVAIAHRSGLDVPGDLTVCGFDDTSLATTIWPELTTIR
QPISAMSRAAVELLVRQIKARKGKSGEKPSHLLLDYELIRRQSDAVPH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaccgagaagctctaggcggcagcgcaacgcccctaccatcaatgatgttgcgaaa
catgcgggtgtgtcgcccatgacggtgtcccgcgtcatcaacggcgaacagatcgtgaga
agcgccaccaaggaaaaggtggaagcggccatcgccgcgctcaactattcgcccagcgcc
gccgcgcgcagtctggcgggcggggacgaaacccgtatcggcctgctctacagcaacccg
tcggcctcctatctgagcgaattcctggtcggcagcctggaccaggcgagccgcagcggg
gtcgatctggtggtggagaaatgggatgaggaaaccgccatcgacacggtggtcgaccat
ctgttgcgcggccggatcaacggagtcatccttccgcccccattgtgcgatcatcaggcc
atgaaggatgcgctgaaggcggcggacatcgtcgcggtcgcggtcgccaccggggaagcg
cccgcagacatgtcggccgtcagcatcgacgaccatgccgcggcgctggcgatgacgcgc
catctgatcgcgctgggccaccgccgcatcggcttcatcaagggccacccgaaccagagc
gccagccaacgccggttcgaaggctatggcgatgcgctggcggaggcgggtatcgagccg
gacgagacgctggtcgagcagggttatttcacctatcgctccggactggatgcggcggaa
cgcattctggcgctgcccgagccgccgaccgcgatattcgccagcaatgacgacatggcg
gcggcggccgtcgccatcgcccatcgcagcggactggacgtgccgggcgacctgaccgtc
tgcggcttcgacgatacgtcgctggcgaccacgatctggcctgaactgacgacgatccgc
cagccgatcagcgccatgtcacgtgccgccgtcgaattgctggtgcggcagatcaaggcg
cgcaagggcaagtcgggggaaaagccttcgcatctgctgctcgattatgagctgatccgg
cggcagtcggacgccgttccgcattga
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