Sphingobium sp. RSMS: EGM87_08575
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Entry
EGM87_08575 CDS
T10811
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00061
Fatty acid biosynthesis
sprs00071
Fatty acid degradation
sprs01100
Metabolic pathways
sprs01212
Fatty acid metabolism
sprs02024
Quorum sensing
sprs04146
Peroxisome
Module
sprs_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EGM87_08575
00071 Fatty acid degradation
EGM87_08575
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EGM87_08575
09145 Cellular community - prokaryotes
02024 Quorum sensing
EGM87_08575
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sprs01004
]
EGM87_08575
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sprs04147
]
EGM87_08575
Enzymes [BR:
sprs01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EGM87_08575
Lipid biosynthesis proteins [BR:
sprs01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EGM87_08575
Exosome [BR:
sprs04147
]
Exosomal proteins
Exosomal proteins of breast milk
EGM87_08575
Exosomal proteins of breast cancer cells
EGM87_08575
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GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UXC92492
LinkDB
All DBs
Position
1:complement(1823492..1825198)
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AA seq
568 aa
AA seq
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MESSEKIWKTRYNHPSAWEQTFPPLSMVEMVANSAAANPQAVMIDFMGRKTSYGEMLHSI
RRVARGLQDMGIEKGDRVGLFLPNVPHYVAAYYGAMMAGATVVNYSPLYTAAELEHQVED
SGTKILFTLSAKALLPTALEVLDNSSLERLVVGCVAEVLPPAKSVLFRLFKRKETVAVPH
DPRLTHYADLLRHGEDPVPVAIDPEQDIALLQYTGGTTGRPKGAMLTHQNLTANARQVRL
IDPHPEAPDRILAVLPFFHVFANTCVLNRTVLNGGEMVMLPRFDGTQVLAALQRTRATSL
PGVPTMYQALLDHPATPNIDFSSLRLCISGGAPLPLEVKQRFEAMTGSKLVEGYGLTESS
PVVCSNPYEGLNKSGTVGQPVPGTRVKLVDREDPTRPPPEGEPGELVFSGPQIMKGYWQR
PDADEEVFVDGWLRTGDVGLIDEDGYVKIVDRLKDMIAVGGFKVFPSEVEKVLYHHPAVK
EALVIGIPDHYRGECPKAFVTLQEGSGIDGAALKDWLNPQLGKHEKVCEVEVRLNLPKTL
VGKLSRKELVAEERAKAEAAMRQTGTAG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagcgaaaaaatctggaaaacccgctataatcatccctctgcctgggagcag
acattcccgcccctgtcgatggtggagatggtggcgaacagcgccgcggccaatccgcaa
gcggtgatgatcgacttcatgggccgcaagacgagctatggcgaaatgctccacagcatc
cggcgggtcgccaggggattgcaggacatgggcatagaaaagggggaccgggtcggtctt
ttcctgcccaatgtccctcattatgtcgcggcctattatggcgcgatgatggccggggcg
acggtcgtcaactattcccccctctacacggccgccgaactggaacatcaggtcgaggat
agcgggacgaagatcctcttcaccctgtcggccaaggcattgctgcccaccgcgctggaa
gtgctggacaacagcagcctggaacggctggtcgtcggctgcgtcgcggaagtcctgccg
cctgccaagtcggtgctgttccggctgttcaagcgcaaggagacggtcgcggtaccgcac
gatccgcgccttacccattatgcggacctgctgcgccatggcgaagaccccgtgccggtc
gccatcgatccggagcaggacatcgccctactgcaatataccggcggcaccaccggccgg
cccaagggcgcaatgctgacccatcagaacctgaccgccaatgcgcggcaggtccgcctg
atcgatccgcatcccgaagcgcccgaccgcatattggcggtgctgcccttcttccatgtc
ttcgccaatacatgcgtgctcaaccggacggtgctgaacggcggcgagatggtgatgctg
ccccgtttcgacggcacgcaggttctggccgcgttgcagcggaccagggcgacctcgctg
cccggcgtgcccaccatgtaccaggcgctgctggatcatcccgcgacgcccaatatcgac
ttctcctccctgcgcctctgcatttccggcggcgcgccgctgccgctggaggtcaagcag
cggttcgaggcgatgacgggctccaagctggtcgagggctatggcctcaccgaaagcagc
ccggtcgtctgctccaacccctatgagggcctcaacaagtccggcacggtggggcagccg
gtgcccggcacccgcgtcaagctggtcgaccgcgaggacccgacccgtccgccgcccgag
ggcgaaccgggcgaactggtcttttccgggccgcagatcatgaagggctattggcagcgg
ccggacgccgacgaggaggttttcgtcgacggctggctgcgcacaggcgatgtcgggctg
atcgacgaggacggctatgtgaagatcgtcgaccggctgaaggacatgatcgccgtcggc
gggttcaaggtcttccccagcgaggtcgagaaggtcctctaccaccatccggcggtcaag
gaagcgctggtgatcggcattcccgaccattatcgcggcgaatgcccgaaggccttcgtc
actcttcaggagggctccgggatcgacggggccgcgctcaaggactggctgaacccgcaa
ctgggcaagcatgagaaggtgtgcgaggtggaggtgcgcctcaacctgcccaagacgctg
gtcggcaagctgtcccgcaaggaactggtggccgaggaacgcgccaaggcggaggcggcg
atgcggcagactggaaccgcgggctga
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