Sphingobium sp. RSMS: EGM87_08845
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Entry
EGM87_08845 CDS
T10811
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
sprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGM87_08845 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGM87_08845 (uvrA)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UXC92541
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Position
1:1871145..1874057
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AA seq
970 aa
AA seq
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MLTTISVRGAREHNLKGVDVDLPRDSLIVITGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARQFLEMMQKPDVEHIDGLSPAISIEQKTTSRNPRSTVATVTEIYDYMRLLWARVGIPY
SPATGLPISAQTVSQMVDRVMQLPEGTRFYLLAPVVRGRKGEYRKELAEWQKAGFTRVRI
DGELYAIEDAPALDKKYKHDIEVVVDRLAVSDDMATRLADSFEQALKLADGLAYVDLADG
AVPGREVEAESTGNLKGAGIPANRIVFSEKFACPVSGFTIAEIEPRLFSFNAPQGACPAC
DGLGERQEFDPELVVPNEALSLKKGAVVPWAKSNPPSPYYMQVLGSLAKEFGFSLDTPWA
DLPGEVKLIILHGTAGRPVTLRFVDGKKSYEVKKPFEGVIGNLNRRLLQTESAWMREELS
KYQTAMPCETCHGARLKPEALAVKIAGEDISMSTRRSVVDALGFFSTLPSRLNDQQNQIA
RAILKEIVERLGFLNNVGLDYLNLDRTSGTLSGGESQRIRLASQIGSGLSGVLYVLDEPS
IGLHQRDNDRLLITLKRLRDLGNTVIVVEHDEDAIRTADYIVDMGPGAGVHGGTIVAQGT
LNELLAHKDSLTADYLNGTRRIEVPPRRRKGSGKKLTVHNARANNLQNVTASIPLGTFTC
ITGVSGSGKSSFTIDTLYAASARTLNGARIVAGPHDKVTGLEHCDKVIDIDQSPIGRTPR
SNPATYTGAFTNIRDWFAGLPEAQARGYKPGRFSFNVKGGRCEACQGDGVLKIEMHFLPD
VYVTCDVCHGARYNRETLEVKFKGKSIADVLDMTVEDAVEFFKAVPPIRDKMAMLAEVGL
GYVKVGQQATTLSGGEAQRVKLAKELSRRATGNTLYILDEPTTGLHFEDVRKLLEVLHAL
VEQGNSVVVIEHNLDVIKTADWIIDMGPEGGVKGGEVVAEGTPEKVAKNARSFTGRYLAP
LLGMEAVAAE
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaccataagcgtccgcggcgcacgcgagcataatctcaagggcgtcgacgtc
gaccttccgcgcgacagcctgatcgtcatcaccggcctttccggctcgggcaagtcctcc
ctcgccttcgacactatctatgccgagggtcagcgccgctatgtcgaatccctctccgcc
tatgcgcgccagttcctggagatgatgcagaagccggacgtcgaacatatagacggcctc
tcccccgccatctccatcgagcagaagacgaccagccgcaacccgcgctccacggtcgcc
accgtgacggagatctacgactatatgcgcctcctctgggcgcgcgtcggcatcccctat
tcgcccgccacgggcctccccatcagcgcccagacggtcagccagatggtcgaccgcgtg
atgcagctgcccgaagggacgcgcttctacctcctcgcccccgtggtccgcggccgcaag
ggcgaatatcgcaaggaactggcggagtggcagaaggccggcttcacccgcgtccgcatc
gacggcgaactctacgcgatagaggacgcccccgccctcgacaagaaatacaagcatgac
atcgaagtggtggtcgaccgcctcgccgtcagcgacgacatggccacccgcctcgccgac
agcttcgaacaagccctgaaactcgccgacggcctcgcctatgtcgacctcgcggacggc
gccgtccccggccgcgaggtcgaagcggaatccaccggcaacctcaagggcgcaggcatc
cccgccaaccgcatcgtcttcagcgagaagttcgcctgccccgtcagcggcttcaccata
gcggagatcgaaccgcgcctcttctccttcaacgccccgcagggcgcctgccccgcctgc
gacggcctgggcgaacggcaggagttcgaccccgaactcgtcgtccccaacgaagccctc
agcctcaagaagggcgcggtcgtcccctgggccaagtccaacccgcccagcccctattat
atgcaggtcctcggctccctcgcgaaggagttcggcttctccctcgacaccccctgggcc
gacctgccgggggaggtgaagctcatcatcctccacggcaccgccggccggcccgtcacc
ctgcgcttcgtcgacggcaagaaaagctatgaggtgaaaaagcccttcgaaggcgtcatc
ggcaatctcaaccgccgcctcctccagaccgaatccgcctggatgcgggaggaactcagc
aaataccagaccgccatgccgtgcgagacctgccacggcgcccgcctcaagccggaggcg
ctggcggtgaagatcgcgggggaagacatctccatgtccacccgccgctcggtggtggac
gcgctcggtttcttctccaccctccccagccgcctcaacgatcagcagaaccagatcgcc
cgcgccatcctcaaggaaatcgtggagcgcctcggcttcctcaacaatgtcggcctcgac
tatctgaacctggaccgcaccagcggcaccctgtccggcggcgagtcccagcgcatccgc
ctcgcctcgcagatcggcagcggcctgtcgggcgtcctctacgtcctcgacgaaccctcc
atcggcctgcaccagcgcgacaatgaccgcctgctcatcacgctcaagcgcctgcgcgac
ctcggcaacaccgtcatcgtcgtggaacatgacgaagacgcgatccgcaccgccgactat
atcgtcgacatggggccgggcgcgggcgtccacggcggcaccatcgtcgcgcagggcacc
ctgaacgaactgctcgcgcacaaggacagcctgaccgccgactatctgaacggcacccgc
cgcatcgaagtcccgccccgccgccgcaagggatcgggcaagaaactcaccgtccacaac
gcccgcgccaacaacctgcaaaatgtcaccgccagcatcccgctcggcaccttcacctgc
atcaccggcgtatcgggctcgggcaagtccagcttcaccatcgacaccctctatgcggcg
tccgcccgcaccctcaacggcgcgcgcatcgtcgccggcccgcatgacaaggtgacgggc
ctcgaacattgcgacaaggtgatcgacatcgaccagtcgcccatcggccgcaccccccgc
tccaacccggcgacctacaccggcgccttcaccaacatccgcgactggttcgccggcctc
cccgaagcgcaggcgcgcggctacaagcccggccgcttcagcttcaacgtcaagggcggc
cgctgcgaagcctgccagggcgacggcgtgctcaagatagagatgcacttcctccccgac
gtctacgtcacctgcgacgtctgccacggcgcccgctacaatcgcgagacgctggaggtg
aagttcaagggcaagtccatcgccgacgtcctcgacatgacggtcgaggacgcggtggaa
ttcttcaaggccgtccccccgatccgcgacaagatggcgatgctggccgaagtgggcctg
ggctatgtcaaggtcggccagcaggcgaccaccctgtccggcggcgaagcccagcgcgtc
aaactcgccaaggaactcagccgccgcgccaccggcaacacgctctatatcttggacgaa
cccaccaccggcctccatttcgaggacgtccgcaagctactggaagtcctccacgccctc
gtcgaacagggcaacagcgtggtcgtgatcgaacacaatttggatgtcatcaagaccgct
gattggatcatcgacatgggaccagaggggggcgtcaaaggcggcgaagtggtcgccgaa
ggcacgcccgaaaaggtcgcaaagaacgcccggagcttcaccggacgctatctcgcgccg
ttgttggggatggaggctgtggcggcggagtga
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