Sphingobium sp. RSMS: EGM87_09210
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Entry
EGM87_09210 CDS
T10811
Name
(GenBank) SDR family NAD(P)-dependent oxidoreductase
KO
K17947
dTDP-L-rhamnose 4-epimerase [EC:
5.1.3.25
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00523
Polyketide sugar unit biosynthesis
sprs01110
Biosynthesis of secondary metabolites
sprs01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EGM87_09210
Enzymes [BR:
sprs01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.25 dTDP-L-rhamnose 4-epimerase
EGM87_09210
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
NAD_binding_10
Polysacc_synt_2
NmrA
KR
adh_short
NAD_binding_4
RmlD_sub_bind
Sacchrp_dh_NADP
TMEM191C
CCDC23
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
UXC89258
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Position
1:complement(1944662..1945774)
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AA seq
370 aa
AA seq
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MEKILVTGGAGFIGRTVCRELLERGHAVRVLDSMIEQVHGDIERPADLDPEVELIRADVR
NGHAVDRALQGVDAVIHLAAEVGVGQSMYEVERYTSVNDVGTAVLFERLIDRPVRRVVTA
SSMSIYGEGLYRDEDGRIVQDAERGSIRDNQKVWDPVDRQGRPLTPIATPEWKQPNLASI
YALNKYVQERTTHIMTAPYGMEGVCLRLFNVYGPGQALSNPYTGVLAIFASRLLNGQKPM
IFEDGGQRRDFVHVGDVARAFADALELPQAAGGTFNIGSGQDRSVTEVAQSLALAMGRND
GEPEIVGKARTGDIRHCFCDTGKAEEVLGFRARQDFQQGLAVLAEWVARQTADDRVNQAR
AELEARGLVA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaagattcttgtcacgggtggcgccggttttattggccggacggtttgccgggag
ttgctggagcgcggccatgccgttcgcgtgctggacagcatgatcgagcaggttcatgga
gacatcgagcggccggccgatctcgatccggaggttgagctgatccgcgccgatgtgcgc
aacggccatgcggtggatcgcgccttgcaaggcgtcgacgccgtcatccacctcgccgcg
gaagtcggcgtgggccagtccatgtatgaagtggagcgctatacctccgtcaacgacgtc
ggcaccgccgtcctcttcgaacggctgatcgaccgtccggtgcggcgtgtggtgacggcc
tcctcgatgagcatctatggcgaggggctgtaccgcgacgaggacggccggatcgtccag
gacgcggagcgcgggtcgatccgcgacaatcagaaggtttgggacccagtcgaccggcag
ggccgcccgctcacccccatcgccacgccggaatggaagcagcccaatctcgcctctatc
tacgcgctcaacaaatatgtgcaggaacgcacgacccacatcatgaccgcgccctatggc
atggagggcgtctgcctgcgcctgttcaacgtctatgggccggggcaggcgctgtccaat
ccctataccggcgtgctggcgatcttcgcgtcgcgcctgctgaacgggcagaagccgatg
atcttcgaggatggtgggcagcggcgcgacttcgtccatgtcggcgacgtggcgcgcgcc
tttgccgatgcgctggaactgccgcaggcggcgggcggcaccttcaacatcggctccggg
caggaccgctccgtcacggaggtggcgcaatcgcttgcactggcgatgggccggaacgac
ggggaaccggaaatcgtcggcaaagcgcgcaccggcgacatccgccattgcttctgcgac
accggcaaggcggaagaggtgctgggcttcagggcccggcaggacttccagcagggcctt
gccgtgctggccgaatgggtggcgcggcagaccgccgacgaccgcgtcaatcaggcgcgg
gcggagctggaagcgcgggggctggtcgcgtga
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