Sphingobium sp. RSMS: EGM87_10045
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Entry
EGM87_10045 CDS
T10811
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EGM87_10045 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprs03400
]
EGM87_10045 (xth)
Enzymes [BR:
sprs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
EGM87_10045 (xth)
DNA repair and recombination proteins [BR:
sprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
EGM87_10045 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UXC89420
LinkDB
All DBs
Position
1:complement(2096387..2097160)
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AA seq
257 aa
AA seq
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MRIATFNINGIKARLPRLLEWLDETRPDIACLQEIKTSDDTFPVKDIEDVGYGAIWHGQK
GFNGVAILARGETPVEVRRGLEGEPEDEHSRYLEADVKGLRVASIYLPNGNPQPGPKFDY
KLRWMKRLRLRAAEIWAEEVPAILAGDYNVIPRDRDVYSVKAMADDALMQPESRAAYRRL
LGDGWTDAIASRHPAGGIWTYWDYQMNAWPRDAGFRIDHLLLSPAAADRLIDAQVDKDFR
GREKASDHAPVWAELTE
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccaccttcaacatcaacggaatcaaggcgcgcctgccgcgcttgctggag
tggctggacgagacccgccccgacatcgcctgtcttcaggaaatcaagacctccgacgac
actttcccggtcaaggacatcgaagatgtcggctatggcgcgatatggcacgggcagaag
gggttcaacggggtagccatccttgcgcgcggcgagacgccggtggaggtccgccgcggc
ctggaaggggagccggaggacgagcatagccgctatctggaagccgatgtaaaggggctg
cgcgtcgccagcatctacctgcccaacggtaatccgcagccgggaccgaaattcgattac
aagctgcgctggatgaagcgtctgcgccttcgcgctgcggaaatctgggcggaggaagtg
ccggcgatcctggcgggcgattataatgtcattccgcgtgacagggacgtttattcggtc
aaggcgatggccgacgacgcgctgatgcagccggaaagccgcgccgcctatcgtcgcctg
ctgggcgacggctggacggatgccatcgcttcccggcacccggcgggcggaatatggacc
tattgggattatcagatgaacgcctggccacgcgacgcggggttccggatcgatcatctg
ctgctcagtcccgccgccgccgaccgcctgatcgacgcgcaggtcgacaaggattttcgt
gggcgggaaaaggccagcgatcatgcccctgtctgggcggaactgaccgaataa
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