Sphingobium sp. RSMS: EGM87_12820
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Entry
EGM87_12820 CDS
T10811
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EGM87_12820 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sprs01007
]
EGM87_12820 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprs03016
]
EGM87_12820 (aspS)
03029 Mitochondrial biogenesis [BR:
sprs03029
]
EGM87_12820 (aspS)
Enzymes [BR:
sprs01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
EGM87_12820 (aspS)
Amino acid related enzymes [BR:
sprs01007
]
Aminoacyl-tRNA synthetase
Class II (A)
EGM87_12820 (aspS)
Transfer RNA biogenesis [BR:
sprs03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
EGM87_12820 (aspS)
Prokaryotic type
Other AARSs
EGM87_12820 (aspS)
Mitochondrial biogenesis [BR:
sprs03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EGM87_12820 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
GAD
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
UXC89933
LinkDB
All DBs
Position
1:complement(2653348..2655132)
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AA seq
594 aa
AA seq
DB search
MHAYRTHTCGALTTAEVGNEVRVSGWVHRKRDHGDLVFIDLRDHYGMVQIVTEVDGPVFR
VIESLRAESVVTVTGKVVARAKEAVNPNLPTGEIEIRALDAVVLSAAADLPLPVAGEQEY
PEDIRLRYRFLDLRRETLHANIVKRTQIIRDMRRRMEDAGFTEYSTPILTASSPEGARDF
LVPSRIHAGKFYALPQAPQQYKQLLMVAGFDRYFQIAPCFRDEDPRADRLPGEFYQLDLE
MSFVTQEDVWNTMEPVIAQVFEAFADGRPVTPAGSFPRIPHAEAMLKYGSDKPDLRNPIL
ISDVTEHFHGSGFGIFASLVESGSVIRAIPAPGAGAGSRKFFDDMNNWARSEGYSGLGYI
NIKDGVPGGPIAKNHGEERTAKLIEALGLGPNDGVFFAAGKESRAAKLAGLARIRVGEQL
DLIDRDRFELCWIVDFPFYEYDEDEKKIDFAHNPFSMPQGGLDALEHQDPLSLKAYQYDM
VCNGYEIASGSIRNQSPELMVKAFEKVGLSQADVEERFGGLYRAFQYGAPPHGGMAAGVD
RIVMLLCGAQNLREITLFPMNQRAEDLLMGAPSPAEFKQLRELHIRVVEPQAKA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcatgcctatcgcacccacacctgcggcgcccttacgacggcggaggtcggcaatgag
gtgcgggtgtccggctgggtgcatcgcaagcgggaccatggcgacctggtgttcatcgac
ctgcgcgaccattatggcatggtgcagatcgtcaccgaggtggatgggccggtgttcagg
gtgatcgagtcgctgcgggccgaaagcgtcgtgaccgtgacgggcaaggtcgtcgcccgg
gcgaaggaagcggtgaaccccaacctgccgaccggcgagatcgagattcgcgcgctggac
gcggtggtgctgtccgccgccgccgacctgccgctgccggtggctggcgagcaggaatat
ccggaggacatccgccttcgctaccgcttcctcgatctgcggcgcgagacgctgcacgcg
aacatcgtcaagcgcacgcagatcatccgggacatgcgccgccgcatggaggatgcagga
ttcaccgaatattcgacgccgatccttacggcgtcgagccccgaaggcgcccgagacttt
ctggtgccgagccgcatccatgcgggcaaattctacgcgctgccccaggcgccgcagcaa
tataagcagttgctgatggtcgcgggtttcgaccgctatttccagatcgcgccctgcttc
cgcgacgaggacccgcgcgccgaccgcctgccgggcgaattctaccagttggacctggag
atgagcttcgtcacccaggaagacgtgtggaacaccatggagccggtgatcgcgcaggtg
ttcgaggcattcgccgacggcaggccggtgacgccagcgggcagcttcccgcgcatcccc
catgccgaggcgatgctgaaatatgggtcggacaagcccgacctgcgcaacccgatcctg
atcagcgatgtgaccgagcatttccatggcagcggcttcggcatcttcgcttcgctggtg
gagagcggcagcgtgatccgcgctattcccgcaccgggcgcaggcgcgggcagccggaaa
ttcttcgacgacatgaacaattgggcgcgcagcgaaggctattcgggccttggctatatc
aacatcaaggacggcgtgcccggcggtcccatcgccaagaaccatggcgaggaacggacg
gcgaagctgatcgaggcgttgggccttggccccaatgacggcgtcttcttcgcggcgggc
aaggaaagccgggcggccaagctggcgggtctggcgcgcatccgcgtgggtgagcagctc
gacctgatcgacagggatcgcttcgaattgtgctggatcgtcgacttccccttctacgaa
tatgacgaggatgagaagaagatcgatttcgcgcacaaccccttctccatgccgcagggg
ggattggatgcgctggagcatcaggacccgctgagcctcaaggcctatcaatatgacatg
gtctgcaacggctatgagatcgcctcgggatcgatccgcaaccagtcgccggaactgatg
gtcaaggcgttcgagaaggtgggcctcagccaggccgatgtggaggagcgcttcggcggc
ctctatcgcgcgttccaatatggcgcgccgccccatggcggcatggcggcgggcgtggac
cgcatcgtgatgctgctttgcggggcgcagaacctgcgcgagatcacgctgttcccgatg
aaccagcgtgcggaagacctgctgatgggggcgcccagcccggcggagttcaagcagttg
cgcgaactgcacatccgcgtcgtggagccgcaggcgaaggcctga
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