Sphingobium sp. RSMS: EGM87_13545
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Entry
EGM87_13545 CDS
T10811
Name
(GenBank) cadherin domain-containing protein
Organism
sprs Sphingobium sp. RSMS
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GFIT
Motif
Pfam:
HemolysinCabind
Cadherin
Cadherin_CELSR2_9th
SH3DP
Motif
Other DBs
NCBI-ProteinID:
UXC90067
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Position
1:complement(2802561..2806298)
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AA seq
1245 aa
AA seq
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MANFFNVVGSQTITAGSEKDQFFAFTRLANLDTVRPDAVLAQLVWNSAILTGSGAAYQLT
ASNIQISMDLLMGGTGTDVIYGSNLSDAIFYNNGVIAGGFGSFDNIEQFWLGDGDDIIDL
TAHGAGGIDYAKDVLVQAGLGNDVIIGGAGKDNLQGDGGNDIIFGWRGSDTISGGAGDDL
LYGDDLGFNNISGDDTIDGGTGNDILYGGRGSDRMTGGDDDDILYGQAGGDNMSGGSGND
ILHGDDADTNSNDTLNGDAGNDQLYGGAGSDELYGGTGDDMLDGGSGNDYMHGGAGNDTI
LAGAGNDVIDGSADVDTLVFSGNRMDYVFTLQTDGSYVAVDQRAGSPEGSKTVRNVEFFQ
FADMTTPSTALNAPPVITSNGGGSSAALAVDENGTAVTTVTATDPDMGQTVSFSIVGGAD
AALFAIDAMTGELRFLTAPNFESPADADRDNVYQLIVAANDGNGGVDTQTLSVTVNDVPD
GFAPVITSNGGGASAAITVNENATAVTGVTATDADSPSISFAIIGGADAALFEIDAATGV
LRFKTAPDYEAAADADHDNIYNVVVQASDGTNSDSQALAVAVANLNDNAPVLTSYGGAAS
VAFSVAENSLLAAIVQASDADGAALSYSISGGADAALFTIDPQTGALSFRTAPDYEAPDD
SNGDRLYHVIVSASDGSNSVSQTLAIGITNLNDNAPVITSNGGGASASISMAENASAVTV
VTATDADGSVPGFAISGGADAALFTIDPVTGALSFINPPDYENRLDADGDGVYQVTVRAT
DGSNVDDQLLSIAITDVAENGRTITGSSGNNMIGPTTTVLAYQTTALNDTIYALAGNDVI
DGGAGADYMDGGAGNDIFYVDTWSDDGFAGNDDQVIELAGGGSDLVYASVSYRLAANVEK
LTLTGAAAINGMGNDLANTITGNDAANILSGGTGADILYGMGGGDTLDGGDDNDTLFGGD
GSDMLIGGLGDDYLDGGTAADNMAGGLGNDSYIVDSWSDDGNSANDDLIVELAGEGTDQV
SASVSYKMAAEIEKLILTGTDPIDGIGNDIANSMTGNGGNNGLWGGLGNDTLLGNGGDDR
LYGEDGQDSLDGGAGNDLLDGGAAGDTLKGGAGSDTLIGGAGKDTLTGGTEADVFLFNRG
DTTLNTASYDRITDFKAGEGDRIDLDFLNGSLPAVDYAERTIATNSFSDALAAANMTAGV
NHVAFVAGSTDGWIFYDANGDGAFEQSVQLVGVNSLAGVDSSSFF
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatttcttcaacgtggtgggaagccagaccatcacggcagggagtgagaaggac
cagttcttcgccttcacccggctcgccaatctcgatacggtgcgccccgatgcggtgctg
gcgcaactcgtctggaactccgcgattctcaccggcagcggcgccgcctatcaactgacg
gcgagcaacatccagatttccatggacctgctgatggggggcaccggcacggacgtcatc
tacgggtccaacctgtccgacgcgatcttctacaataatggcgtgatcgcaggcggcttc
ggcagcttcgacaatatcgagcagttctggctgggcgacggcgacgacatcatcgacctg
acggcgcatggggcgggcgggatcgactatgccaaggacgtgctggtccaggcgggcctc
ggcaatgatgtcatcatcggcggcgcgggcaaggataatcttcagggcgacggcggcaac
gacatcatcttcggctggcgcggcagcgacaccatttccggcggagcgggcgacgacctg
ctctatggcgacgatctgggcttcaacaacatttcgggcgacgacaccatcgacggcggc
acgggcaacgacatcctctatggcgggcgcggcagcgacaggatgaccggcggcgacgat
gacgacatcctctatggccaggccggcggcgacaatatgtcgggcggctcgggcaatgac
attctccatggcgacgatgccgacaccaacagcaacgacacgctgaacggcgatgccggg
aacgaccagctctatggcggcgcgggcagcgacgagctgtatggcggcaccggcgacgac
atgttggatggcggcagcggcaacgattatatgcatggcggcgcaggcaacgacacgatc
ctcgccggcgcgggcaatgacgtgatcgacggcagcgcggacgtcgacacgctcgtcttc
tcgggcaaccggatggattatgtcttcacgctccagaccgacggcagctatgtcgcggtc
gaccagcgtgcaggctctccggagggcagcaagacagtccgcaacgtggaatttttccag
ttcgcggacatgacgacgccttccaccgcgctgaacgccccgccggtcatcacctcgaac
ggcggcggctccagcgcggcgctggcggtcgatgagaacggcaccgccgtgaccaccgtc
accgcgacggaccccgacatgggacagacggtctccttctccatcgtgggaggcgcggac
gcggcgctgttcgcgatcgacgcgatgacgggcgaattgcgtttcctcacagcgcccaat
ttcgaaagcccggccgatgcggaccgcgataatgtctatcaactgatcgttgccgccaat
gacggcaatggcggcgttgacacgcagacgctctccgtgaccgtgaacgatgtgccggac
ggttttgcgccggtcatcacctccaatggcggcggcgcaagcgcggcgatcaccgtcaac
gagaatgcgacggcggtgaccggcgtgaccgccaccgatgccgacagcccgtcgatcagc
ttcgccatcataggcggagcggacgccgcgctcttcgaaatcgatgcggcaaccggcgtc
ctccgcttcaagaccgcacccgattatgaagccgccgccgacgccgatcacgacaatatc
tacaatgtcgtggtgcaggccagcgacggcaccaacagcgacagccaggcgctggcagtc
gcggtcgccaatctcaacgacaatgcgccggtgctgacctcttatggcggggcggcttcg
gtcgccttctccgtcgcggaaaacagcctgcttgccgccatcgtgcaggccagcgacgcg
gatggcgctgcgctcagctacagcatcagcggcggcgctgacgcggcgttgttcaccatc
gacccgcagaccggcgcgctgagtttcaggacggctccggactatgaagcgccggacgac
agcaatggcgaccgcctctaccatgtgatcgtcagcgcgagcgacggcagcaacagcgtc
tcgcagaccctggccatcggcattaccaatctgaacgacaatgcgccggtcataacctcc
aatggcggcggcgcctcggcgtcgatcagcatggcggaaaatgccagcgccgtgaccgtg
gtgacggccaccgatgcggacggctccgtccccggtttcgccatttcagggggagcggac
gccgcgcttttcaccatcgatccggtgaccggcgcactgtccttcatcaacccgcccgat
tatgagaaccggctcgatgccgatggcgacggcgtctatcaggtgacggtgcgcgcaacc
gacggcagcaacgtcgatgatcagcttttgtccatcgccatcaccgatgtcgcggaaaac
gggaggacgatcaccggatcatcgggcaacaacatgatcggcccgacgaccaccgtgctc
gcctatcagacgactgccctcaacgacaccatctacgcccttgccggcaatgacgtcatc
gatggcggggcgggcgccgactatatggatggcggcgcaggcaacgacatcttctatgtc
gacacctggtcggacgacggctttgccggcaatgacgatcaggtgatcgaactggcgggg
ggcggcagcgatcttgtctatgcctccgtcagctatcgccttgccgccaatgtcgaaaag
ctgacgctgaccggcgcggcggcgatcaacggcatgggcaatgatctggccaacacgatc
accggcaatgacgcggccaacattctgtcgggcgggacgggcgcggacattctctatggc
atgggcggcggcgacacgctggatggcggtgacgataacgacaccctcttcggcggcgac
ggcagcgacatgctgatcggcgggctgggcgacgactatctggacggcggcacggccgcc
gacaacatggccggtgggctgggcaatgacagctatatcgtcgacagctggtccgacgac
ggcaacagcgccaatgacgacctgattgtcgaactggcgggcgaggggaccgatcaggtg
agcgcctccgtcagctacaaaatggcggccgagatcgagaagctgattctgaccggcacg
gacccgatcgacggcatcggcaacgacatcgccaacagcatgacgggcaatggcggcaat
aatggcctctggggcggcctgggcaacgacaccctgctgggcaatggcggcgacgaccgg
ctctatggcgaggacgggcaggacagcctggacggcggcgcgggcaacgacctgctggac
ggcggggcggccggcgatacgctgaagggcggcgcgggcagcgacacgctgatcggcggc
gcaggcaaggacacgctgaccggcgggacggaggcggatgtcttcctgttcaaccgcggc
gacacgacgctcaacacggcgagctatgaccggatcaccgacttcaaggcgggcgagggc
gaccgcatcgacctggacttcctgaacggctccctgcccgccgtcgactatgccgaacgg
accattgccaccaacagcttctccgacgcgctggctgccgccaatatgaccgccggggtc
aatcatgtggctttcgtcgccgggtcgacggacggctggatattctacgacgccaatggc
gacggcgcattcgaacagagcgtccagcttgtcggggtcaacagcctggccggggtggat
tcgagcagtttcttctag
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