Sphingobium sp. RSMS: EGM87_14435
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Entry
EGM87_14435 CDS
T10811
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs03030
DNA replication
sprs03430
Mismatch repair
sprs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGM87_14435 (dnaQ)
03430 Mismatch repair
EGM87_14435 (dnaQ)
03440 Homologous recombination
EGM87_14435 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sprs03032
]
EGM87_14435 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sprs03400
]
EGM87_14435 (dnaQ)
Enzymes [BR:
sprs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGM87_14435 (dnaQ)
DNA replication proteins [BR:
sprs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGM87_14435 (dnaQ)
DNA repair and recombination proteins [BR:
sprs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGM87_14435 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UXC90237
LinkDB
All DBs
Position
1:2969766..2970458
Genome browser
AA seq
230 aa
AA seq
DB search
MREIIFDTETTGFDPASGDRLVEIGCIELLNRVPTGRTFHAYYNPQRSMPAAAEAVHGLS
DAFLKDKPLFSHGVEELLAFLEDSHLVAHNARFDFGFLNHELKLCKLPEVSMERMIDTVA
IARQLHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAQLYIELTGGRQIGLGLAQEE
EKLVVNMELAAEVAVRPVRPARVFAAGAEELERHAAFVATLDKPLWLEEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcattttcgacaccgaaacgacgggattcgacccagcctccggcgatcgc
ctggtcgagatcggatgcatcgaactcctcaaccgggttcccacgggccgcaccttccac
gcttattacaatccgcagcggtcgatgccggccgcggccgaggcggtgcacggcctgtcc
gacgcttttctgaaggacaagccgctattttcccatggggtggaggaactgctcgccttt
ctggaggacagccatctggtcgcccataatgcgcgcttcgacttcggcttcctcaatcac
gaactgaagctgtgcaagctgcctgaagtgtcgatggagcggatgatcgacaccgtcgcc
atcgcccggcagcttcaccccggcgccaagcacagcctcgacgcgctctgcacccgctac
ggcatcgaccgcagccatcgcatcaagcatggcgcgctgctcgacgccgaattgctggcc
cagctttacatcgaactgaccggcggccgtcagatcggcctcggtcttgcacaggaggaa
gagaaactcgttgtaaatatggaacttgcggcggaagtcgcggttcgccctgttcgtccc
gcgcgtgtctttgcggcaggcgcggaggagctggagcggcatgcagcgttcgtcgcgacg
ctggacaagccgctctggcttgaggaggcctga
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