Sphingobium sp. RSMS: EGM87_20140
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Entry
EGM87_20140 CDS
T10811
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprs Sphingobium sp. RSMS
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprs02000
]
EGM87_20140
Transporters [BR:
sprs02000
]
Other transporters
Pores ion channels [TC:
1
]
EGM87_20140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
OMP_b-brl
Motif
Other DBs
NCBI-ProteinID:
UXC93583
LinkDB
All DBs
Position
2:455986..458334
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AA seq
782 aa
AA seq
DB search
MTYRRYLAATCAALFISAPAFAQDNAQPQAEGVSSGDIVVTARRRDEALQDVPISVSAIS
GEQLSRSGVTDVQGLQYRTPSLSITSAQSQRNTVAFSLRGQRTQETQLFTDPPVGTYFAE
VVQPRPYGFGNSLYDLESVQVLKGVQGTLFGRNMTGGAVLVEPAHPKLGEFAGEVRGQYG
NYDMHDLFGMVNVPVGDSVALRFAGKTRERDGWARDIGSGLRLDNQNYDTFRVSALVSPG
NGIESLTIFDWFKSRENGTASFLTSINYPSALNNYARLADIPGQFAEAQQLFRSRRFTLN
SGSGNGSNLDVFGLPRESIKNWGITNKTTWDLADGLTLKNIFGYRKERRDTVQDYDGIPA
FLIAPYQFARSRNISEELQLQAKMFENRLDLIVGGYYFEEKGIDGSLANTLPQLNILGAG
LNPATTDATLFVTSNPGEGYSRTAAAFVAGTFKVTDQLSLSGGLRYNYDKRKITVSPSQP
NYPNADGTFGRCSFDTDTSTAGVQRVPLSQCSFTNSKSFKEWTYDATVQYEPSPEVTTYA
SYRHGFRAGGFSTRATDAITLRPFLPEFVDEYEIGLKTNHRLGAGRLTTSTALFRQDGSD
VQKQRATFIDGNVFTIVDNTAKQRNVGGEFEANFSTDSFSLAAFYSYTKVDIRAGRVVLN
GLTEFEQRGVPKHQLGATATISPPVSEDLGQLNFVLNYTWRSKIYLDDFEIQGVQPAYSL
INLRAELNNVGGSGASVAAFVNNALNETYRIGVLGLIAEGLGFQNSVYGEPRTYGVEVGF
KF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacctatcgacgctatcttgccgcgacctgtgcggccctgttcatatccgcgcctgcc
ttcgcgcaggataatgcgcagccgcaggccgaaggcgtgtcgagcggcgacatcgtggtc
acggcgcgccgtcgcgacgaagcgctccaggatgtgccgatttccgtctccgccatttcg
ggcgaacagctttcccgctcgggcgtgaccgacgttcagggtctgcagtatcgcacccct
tcgctgtcgatcacgagcgcgcagagccagcgcaacaccgtcgccttctcgctgcgcggc
cagcgcacgcaggaaacgcagcttttcaccgacccgccggtcggcacctatttcgctgaa
gtggtgcagccgcgcccctatggtttcggcaacagcctttacgatctggaatcggttcag
gttctgaagggcgtccagggcacgctcttcggccgcaacatgaccggcggcgcggtgctg
gtcgagcctgctcatccgaagctgggcgaattcgccggcgaagtgcgcggccaatatggc
aattacgacatgcacgacctgttcggcatggtgaatgtgccggtcggggattccgtcgcc
cttcgcttcgcgggcaagacccgcgaacgcgacggctgggcgcgcgacatcggcagcggc
ctgcgcctcgacaaccagaattacgacacgttccgcgtgtcggcgctggtctcgcctggc
aacggcatcgaatcgctgaccatattcgactggttcaagtcgcgggaaaacggcacggcg
tctttcctgacgtccatcaactatccttcggctctcaacaactatgccagactcgcggat
attccgggtcagttcgcggaggcgcagcagcttttccgctcgcgccgcttcacgctcaat
tccgggtcgggcaatggcagcaatctcgacgtgttcggcctgccgcgggagagcatcaag
aactggggcatcaccaacaagacgacctgggatctggccgacggcctgacgctgaagaat
atcttcggttatcgcaaggagcgtcgggataccgttcaggattatgacggcattcccgcc
ttcctgatcgccccttatcagtttgcgcgttcacgcaacatttccgaagaactgcaactt
caggccaagatgttcgaaaaccggctcgacctcatcgtcggcggttattatttcgaggaa
aagggcattgacggttcgctcgccaatacgctgcctcaactgaatatcctgggagccggc
ctcaatcctgcgacgacagacgcgacgctgttcgtcaccagcaatccgggcgaaggctat
tcgcgcaccgcggccgcattcgtcgccggcaccttcaaggtcacggatcagctcagcctg
tccggcggtcttcgctataattatgacaagcgcaagatcaccgtttcgccttcgcagccc
aactatcccaatgctgacggcaccttcggccgctgctcgttcgacaccgatacgtcgact
gccggcgttcagcgggttccgctcagccaatgttccttcaccaacagcaagtcgttcaag
gaatggacctacgacgcgacggtgcaatatgagccgagcccggaagtcaccacctatgcg
tcctatcgccatggtttccgcgcgggcggcttttcgacccgggccaccgacgcgatcacg
ctgcggccgttcctgcccgaattcgtcgatgaatatgaaatcggcctgaagaccaaccac
cggctgggcgcgggccgcctgaccaccagcaccgccctgttccgtcaggacggcagcgac
gtgcagaagcagcgcgcgaccttcatcgacggcaatgtcttcaccatcgtcgacaacacc
gccaagcagcgcaatgtcggcggcgagttcgaggcgaatttcagcaccgacagcttctcg
ctggcggccttctattcctatacgaaggtcgacatccgagcaggccgggtcgtgctgaac
ggcctgaccgagttcgagcagcgcggcgtgcccaagcatcagctcggcgccacggcaacc
atttcgccgccggtcagcgaagatctgggccagctcaacttcgtcctgaactatacctgg
cgcagcaagatctatctcgacgacttcgagatacagggcgtgcagcccgcctattcgctg
atcaacctgcgcgccgaactcaacaatgtcggcggttcgggcgcttcggtggcggccttc
gtcaacaatgcgctgaacgagacctaccgcatcggcgtgctgggcctcatcgcggaaggg
ctgggcttccagaacagcgtctatggcgaaccgcgcacctatggcgtggaagtcggcttc
aaattctga
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