Sphingobium sp. RSMS: EGM87_20790
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Entry
EGM87_20790 CDS
T10811
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sprs Sphingobium sp. RSMS
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprs02000
]
EGM87_20790
Transporters [BR:
sprs02000
]
Other transporters
Pores ion channels [TC:
1
]
EGM87_20790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
PRAS_NT
Motif
Other DBs
NCBI-ProteinID:
UXC92751
LinkDB
All DBs
Position
2:complement(603168..606083)
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AA seq
971 aa
AA seq
DB search
MRVASTRLALLSGIAFAAMAPPGPSFAQQQGAAAPADGASEPPDAAPAGSPIPAPSSPPA
PSDPPVEADIVVSGSRIVRDGFNAPTPISVIGAEQVQNRAAISIGSVLQEAPAFRPSQNP
SAARTFTNSGYYADLRGLDANRTLVLVDGHRFVPTSNVGTVDLSLIPTFLVERAEVVTGG
ASAAWGSDAVAGVVNIILDHKLTGLRGEAQAGISEEGDGYNMKVALGGGTSFADGAGHII
LGAEYSYDEGVGDNYTRDWGREEWWFVTNPNFATNGQPARIWTKNVHYASQTPGGLIATG
PLRGTAFAPDGTPFQFNFGEVWGDDQIGGDGYGIGSWTGVNIRQPHERVVAMGRVSFESG
DTSFFAEGNYAHVDWTVPSIGTRNFGTQSPSTSAFSPIVVSADNPFIPAATRAAIDNYNA
TRPAGAPALTSFQLGRFGTENFQQIVSKANETARGLIGAEGSFGGIKWDVYAQYGQNRFI
RGVIGQRIEANWRRAIDVVNVTQNGVSTPVCRDLLSPNAAIRNAAAGCVPYNIFGTGTAS
DAAKAYVTGLSLQHQKTTQTVVAGNLQAEPFSTWAGPVSIATGIEYRRETLLSIPSPLEA
ARAFSSANSAFVDGSFDVKEGYVELLVPLAADRPFFRHLDVNAAARYADYSGAGSVWTWK
AGVNWSITDEFRVRATRSRDVRAPNLTEMFTPERNQNARIIDPVTNTAYTVRTFSVGNRN
LEPEVANSLTAGFVYQPQWASGLQLSVDYYDIDIDGVINTSVAQVVLDSCVAGDASRCAF
ITRPVANGPITEMVTPYLNLNRFQTSGVDIELSYRMPLGAGNLSTRLLATYVWDYRLTDT
TGAIDRSGQNGTPVNGGTVGMVDLTMNATIAYDTDDFGVNLQARYINDGKIDTAAVPGTA
TSLNINRIPSRIYFNLGGKLVLTRSEDNDRKVELFGTIDNLLDTDPPFPSFDGTYYDLVG
RAYRLGVRFRY
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttgcgtcgaccagacttgccctgctttcaggtatcgccttcgccgccatggct
ccgccgggtccatccttcgcgcagcagcaaggtgcggcggccccggcggatggcgcttcg
gaaccgccggacgccgccccggccggctccccgatcccggccccatcctcgcctcccgcg
ccgtccgatccaccggtggaggccgacatcgtcgtttccggttcgcgcatcgtgcgggac
ggcttcaacgcccccacgcccatttccgtgatcggtgcggagcaggtgcagaaccgcgcc
gcgatcagcatcggctcggtgctgcaggaggcgcccgccttccgccccagccagaacccg
tcggcggcgcgcaccttcaccaatagcggctattatgccgacctgcgcgggctggacgcc
aaccgcaccctcgtcctggtcgacggccatcgcttcgtgccgacgtccaatgtcggcacc
gtcgacctcagcctcatccccaccttcctggtcgaacgcgccgaggtggtgaccggcggc
gcgtccgccgcatggggctccgacgccgtggccggcgtcgtcaacatcatcctcgaccac
aagctgaccgggcttcgcggcgaagcgcaggccggcatctcggaggaaggcgacggctat
aacatgaaggtcgctctcggcggcgggacaagctttgccgacggcgcgggccatatcatc
ctgggcgcggaatattcctatgacgagggggtgggcgacaattacacgcgcgactggggg
cgggaggaatggtggttcgtcaccaatcccaatttcgccaccaacggccagcccgcgcgc
atctggacgaagaacgtccactacgcctcccagacgcccggcggcctgatcgccaccgga
ccgttgcgcggcaccgccttcgcgccggacggcacccccttccagttcaacttcggggaa
gtatggggcgacgaccagatcggcggcgacgggtacggcatcggttcctggaccggcgtc
aacatcaggcagccgcatgagcgcgtcgtcgccatgggccgggtcagcttcgaaagcggc
gacaccagcttcttcgcggagggcaactacgcccatgtcgactggaccgtgcccagcatc
ggcacgcgcaatttcggcactcagtcgcccagcaccagcgccttttcccccatcgtcgtc
agcgccgacaatcccttcatcccggcggcgacgcgggcggcgatcgacaattacaatgcg
acgcggccggccggcgcgccggcgctcaccagcttccagctcggccggttcgggaccgag
aatttccagcagatcgtcagcaaggcgaatgagaccgcccgcggcctgatcggcgccgaa
ggctccttcggcggcatcaaatgggacgtctatgcgcaatatggccagaaccggttcatc
cgcggcgtcatcggccagcggatcgaggcgaactggcgccgcgccatcgatgtggtgaac
gtgacgcagaacggcgtttccacccccgtctgccgcgacctgctcagccccaacgccgcc
atccgcaacgcggcggcgggctgcgtgccctataatatcttcggcaccggcacggccagc
gacgcggccaaggcttatgtgaccggcctctcgctccagcatcagaagacgacccagacg
gtcgtcgccggcaatctccaggcggaacccttctcgacctgggcgggccccgtgtccatc
gcgaccggcatcgaatatcgccgggagacattgctctccatccccagcccgctggaggcg
gcccgcgccttttccagcgccaactccgccttcgtggacggatcgttcgacgtgaaggaa
ggctatgtggagctgctcgttccgctggcggcggacaggccattcttccgccatctggat
gtcaacgccgccgcccgctacgccgattatagcggcgcgggcagcgtgtggacctggaag
gcgggcgtgaactggtcgatcaccgatgaattccgcgtccgcgccacccgctcgcgcgat
gtccgcgcccccaatctcaccgaaatgttcacgccggaaaggaatcagaacgcgcgcatc
atcgacccggtcaccaatacggcctatacggtgcgcaccttctccgtcggcaacaggaac
ctggaacccgaagtcgccaattcgctgacggcggggttcgtctatcagccgcaatgggca
tcgggcctgcaattgtcggtcgactattatgacatcgacatagacggcgtcatcaacacc
tccgtcgcgcaggtcgtcctcgactcctgcgtcgcgggcgacgccagccgctgcgccttc
atcacccgccccgtcgccaacggtccgatcacggagatggtgacgccctatctgaacctc
aaccggttccagaccagcggcgtcgacatcgaactgtcctatcgcatgcccctcggcgcg
ggcaatctcagcacgcggctgctcgccacctatgtctgggactacaggctgacggacacg
accggggccatcgatcgttccggacagaatggaacgcccgtcaatggcggcacggtcggc
atggtggacctgacgatgaacgcgaccatcgcctatgacaccgacgatttcggcgtgaac
ctccaggcgcgctacatcaacgacggcaagatcgacaccgccgccgtgccggggacggcg
accagcctcaacatcaacaggattcccagccgcatctacttcaatctgggcggaaagctt
gtcctgacccgcagcgaggacaacgacaggaaggtggaactgttcgggacgatcgacaat
ctgctcgacaccgatccgccattcccttccttcgacgggacctattatgacctggtgggt
cgtgcctatcggctcggcgtgcgcttccgctattga
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