Sphingobium sp. RSMS: EGM87_21130
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Entry
EGM87_21130 CDS
T10811
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00520
Amino sugar and nucleotide sugar metabolism
sprs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
EGM87_21130
Enzymes [BR:
sprs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
EGM87_21130
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GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
UXC92813
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Position
2:694973..696604
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AA seq
543 aa
AA seq
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MTNISNPILRGFNPDPSIVRVGDDFYIATSTFEWYPGVQIHHSRDLVNWRLVARPLDRAG
QLDMRGDPDGCGVWAPDLSHADGRFWLVFTDVKRYGATTVQGAKGMSLRDFPNYVVTCET
VDGIWSNAVHLNSSGFDPALFHDDDGRSWMLNMLWDHRPGHGRFAGIQAQELDRATLKLV
GEPTLIFRGTERGFTEGPHLYKHGGFYHLLVAEGGTGWDHAVVMARAPDLLGPYEVHPDG
AILTSAGRKDLPIARAGHGDLVELADGSTWLAYLCGRPLPGRERCIMGRETAIQPMLWGE
DGWLRTVNGDARPDGTPPAPDLPPAPWDIERWDGRFDLPQLPRDLQWLRSPAPERLFSLT
ARPGFLRLYGRETVGSLFEQALVARRQTAFRFTATTSLSFEPRSFQQAAGLIYYYNSTKF
YYLCVSAEEGRRQLQILSASPENPEGNRFDIVADRLPDGAIDLRAAVDGDRLRFAWRADG
EDWHILPDVHDASILSDEVTHPGLPNFTGAFIGMACQDLSGQAHPADFASFVYVEEEFGA
PVD
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacatttccaaccccattttgcggggcttcaatcctgatccgtcgatcgtgcgc
gtgggcgacgatttctacatcgcgacatccaccttcgaatggtatccgggcgtgcagatc
caccacagccgcgacctggtgaactggcggctcgtcgcccgcccgctcgaccgcgcgggg
cagctcgacatgcgcggcgatcccgacggctgcggcgtatgggccccggacctcagccat
gcggacggccgcttctggctggtcttcacggacgtcaagcgttacggcgccaccaccgtc
cagggggcgaagggcatgtcgttgcgcgacttccccaattatgtcgtcacctgcgaaacg
gtcgacggcatatggtcgaacgcggtgcacctcaacagcagcggtttcgacccggcgcta
ttccatgacgatgacgggcgcagctggatgctcaacatgctgtgggaccaccggcccggc
catggccggttcgccggcatacaagcgcaggaactggaccgcgcgacgctgaagctggtc
ggcgaaccgacgctgatcttcaggggcacggagcgcggctttaccgaagggccgcatctc
tacaagcatggcggcttctatcatctgctggtcgccgaagggggcacgggctgggatcat
gccgtcgtcatggcgcgcgcgcccgacctgctcggcccctatgaagtgcatccggatgga
gccatattgaccagcgcgggccgcaaggacctgcccatcgcccgcgccggccacggcgat
ctggtggaactggcggatggcagcacctggctggcctatctgtgcggccgtccgctgccg
gggcgcgaacgctgcatcatgggccgcgaaaccgcgatacaaccgatgctgtggggcgag
gatggctggctgcgcaccgtcaacggggacgcgcggcccgacgggacgccgcctgcgccg
gacctgccgcccgccccttgggacatcgaacgctgggacggccgcttcgaccttccccaa
ctgccgcgggacctgcaatggctgcgcagccccgccccggaacggctgttcagcctgacg
gcccggcccggcttcctgcgtctttacgggcgtgaaacggtcggcagcctgttcgagcag
gcgctggtggcgcggcggcagaccgccttccgcttcaccgcgacgacctcgctctccttc
gagccccgcagcttccagcaggcggcgggcctcatctattattataacagcaccaaattc
tattatctatgcgtcagcgccgaggaaggccggcggcagctccagatcctctccgcttcg
cccgaaaatccggagggcaacagattcgacatcgtcgccgaccggctgcccgacggcgcg
atcgatctgcgcgccgccgtggatggcgaccggctgcgcttcgcctggcgagccgatggg
gaagactggcacatccttccggatgtccacgacgccagcatcctgtcggacgaagtcacc
caccccggcctgcccaacttcaccggcgccttcatcggcatggcctgccaggacctgtcg
ggccaggcccatccggcggatttcgccagcttcgtctatgtggaggaagagttcggcgct
ccggtggactga
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