Sphingobium sp. RSMS: EGM87_21150
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Entry
EGM87_21150 CDS
T10811
Name
(GenBank) glycoside hydrolase family 43 protein
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs00520
Amino sugar and nucleotide sugar metabolism
sprs01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
EGM87_21150
Enzymes [BR:
sprs01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
EGM87_21150
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GFIT
Motif
Pfam:
Glyco_hydro_43
GH43_C2
Motif
Other DBs
NCBI-ProteinID:
UXC93699
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Position
2:700689..702308
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AA seq
539 aa
AA seq
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MLGAATAEAAPARFDRFAYEGKSIEKIAVKPGEYRNPILTGYYPDPSVMRVGDDYYLVNS
SFAHYPGLPIFRSKDLVNWTQIGNAIDRPEQLDFNGRRISQAVFAPAISWHEGTFYIVNT
CVECRGNFIITAKDPAGPWSNPIWLPFEGIDPSIYWEGDKAYIVNNRAPNEPPRYDGHRA
IWIQEYDWRAGKMVGESTQLINGGVDISKKPVWIEGPHIFRKDGYYYLTAAEGGTSVNHS
QVVFRSKDLRGPYTPYEGNPILTQRDLDPARSNFIGSAGHAQLVETQRGDWWATFLAVRP
YDGDDHYNIGRETFLLPVTWKDGWPIILPRGQAIPHAAKRPDLPPQPRPAIPTSGDFSYV
EDFNGTRLPMQWIGIRTPHKPFYRIRDGALELESGAAIGDLNGVPAFIGRRQQHANATFS
TTLRYTPVKDGDRAGLAAVQSDRSNLFFGLTRIAGQPVVALYTRDAADADTLVAYAPVAT
NGPVTLTMRVTGGTVAFDYGAGGKTRTLKQGVDATLLSTRKAGGFVGTVVGPYHYTPAP
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgccgccaccgccgaggcggcgcccgcccggttcgatcgctttgcctatgaa
ggaaagtcgatcgagaagatcgcggtcaagccgggtgaatatcgcaatccgatcctgacc
ggctattatcccgatccatcggtcatgcgcgtgggggacgactattatctcgtcaactcc
tccttcgcccattatccgggcctgccgatcttcaggtcgaaagacctcgtcaactggacg
cagatcggcaatgcgatcgaccggccggaacagctcgacttcaacggccgccgcatttcg
caggccgtattcgcgccggccatcagctggcacgagggcactttctacatcgtcaacacc
tgcgtcgaatgcaggggcaatttcatcatcacggcgaaagaccctgccggcccctggtca
aaccccatatggctgccgttcgaagggatcgacccctccatctactgggagggggacaag
gcctatatcgtcaacaaccgcgcgcccaacgaaccgccccgctatgacgggcaccgcgcc
atctggattcaggaatatgactggcgcgccggcaagatggtcggggaaagcacgcaactc
atcaacggcggcgtcgacatcagcaaaaagccggtctggatcgaagggccgcatatcttc
aggaaggacggctattattatctgaccgcggccgaaggcggcaccagcgtcaaccattcg
caggtcgtgttccgttcgaaggatctgcgcggcccctacacgccctatgaggggaacccg
atcctcacccagcgcgatcttgaccccgcgcggtcgaacttcatcggatcggccggtcac
gcccaactggtggagacgcagaggggcgactggtgggcgaccttcctggccgtgcgtccc
tatgatggcgacgaccattacaatatcggccgcgaaaccttcctgctgccggtaacatgg
aaggacggctggccgatcatcctgccgcgcggtcaggcgatcccccatgcggcgaagcgc
cccgaccttccgccgcagcccaggccggcgatcccgacgagcggcgacttttcctatgtc
gaggatttcaacggcacgcgcctgcccatgcagtggatcggcattcgcaccccgcacaag
cccttctaccggatcagggacggcgcgctggaactggagagcggggcggccatcggggac
ctgaacggcgtccctgccttcatcgggcggcggcagcagcatgccaatgccaccttctcc
accacgctgcgctacacgccggtcaaggacggcgaccgcgccgggctggccgccgtgcag
agcgaccgcagcaacctcttcttcggcctgacccgcatcgccggccagcccgtcgtcgcg
ctctacacccgcgatgcggcggacgccgacacgctggtcgcctatgcccccgtcgccacg
aacggacccgtgaccctgaccatgcgcgtgaccggcgggacggtggcgttcgactatggc
gccggcggcaagacccggacgctgaagcagggggtggacgccacgctgctcagcacccgg
aaggccgggggcttcgtgggcacggtcgtcggcccctatcactacacacccgccccatga
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