Sphingobium sp. RSMS: EGM87_21590 Help Entry EGM87_21590       CDS       T10811                                  Symbol fdhF Name (GenBank) formate dehydrogenase subunit alpha   KO K00123   formate dehydrogenase major subunit [EC:1.17.1.9] Organism sprs  Sphingobium sp. RSMS Pathway sprs00630   Glyoxylate and dicarboxylate metabolism sprs00680   Methane metabolism sprs01100   Metabolic pathways sprs01120   Microbial metabolism in diverse environments sprs01200   Carbon metabolism Brite KEGG Orthology (KO) [BR:sprs00001]  09100 Metabolism   09101 Carbohydrate metabolism    00630 Glyoxylate and dicarboxylate metabolism     EGM87_21590 (fdhF)   09102 Energy metabolism    00680 Methane metabolism     EGM87_21590 (fdhF) Enzymes [BR:sprs01000]  1. Oxidoreductases   1.17  Acting on CH or CH2 groups    1.17.1  With NAD+ or NADP+ as acceptor     1.17.1.9  formate dehydrogenase      EGM87_21590 (fdhF) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Molybdopterin Molydop_binding Fer2_4 Molybdop_Fe4S4 NADH-G_4Fe-4S_3 Fer4 Fer4_7 Fer4_Nqo3 Fer4_21 Fer4_10 Fer4_6 Fer4_9 Fer4_15 Fer4_8 Fer4_2 Fer4_16 Fer4_4 TetR_C_34 TPP_enzyme_M Motif Other DBs NCBI-ProteinID:  UXC92900 LinkDB All DBs Position 2:complement(810375..813221) Genome browser AA seq 948 aa AA seqDB search MSYTRETDHGTPPAISTGRSVTLTIDGDTVTMPEGTSIMRAASLTGCSIPRLCATDNVES FGSCRLCLVEVEGRNGYPASCTTPIAEGMVVRTQSERLKQLRRGVMELYISDHPLDCLTC PANGDCELQEQAGAVGLRDVRYGYDGATNMGQVKDQSNPYFDFDPSKCIVCSRCVRACDE VQGTFALTIEGRGFDSRVSPSQGQDFLSSECVSCGACVQACPTATLTEKKVVETGTPDRA VVTTCAYCGVGCTFRAEMRGEELVRMVPWKDGKANRGHSCVKGRFAWGYAQHRDRILKPM IRASVNEPWREVSWEEAIAHTASEFRRIQAKYGTRSIGGITSSRCTNEETFLVQKLIRQG FGNNNVDTCARVCHSPTGYGLKTTFGTSAGTQDFDSVMQADVILVIGANPTDGHPVFASR MKKRLRQGAKLIVIDPRRIDLVKSPHVEASHHLPLRPGTNVAMLTALAHVIVTEKLYDEA FIRDRCDWDEFAEWADFVSEPQRSPEAVEPLTGVEATEVRAAARLYATGGNGAIYYGLGV TEHSQGSSTVMAIANLAMATGNIGREGVGVNPLRGQNNVQGACDMGSFPHEFSGYRHVSD DAVRGQFEQAWGVTLDAEPGLRIPNMLDAATDGTFKSIFIQGEDILQSDPNTHHVAAGLA AMECVVVQDLFLNETANYAHVFLPGSTFLEKDGTFTNAERRIQRVRRVMAPLNGHADWQI VQLVAQAMGLGWSYAHPSEIMDEIAALTPTFAGVHYDRLDAEGSLQWPANDAAPDGTPTM HIGGFVRGRGKFVVTDYVPTDEKTGPRFPLLLTTGRILSQYNVGAQTRRTANAAWHPEDR LEIHPNDAENRGISDGDWVSLKSRAGETSLRALITERVAPGVVYTTFHHPDTQANVITTD YSDWATNCPEYKVTAVQVMRSNGPSDWQRDYAEQARHSRRIAPLEAAE NT seq 2847 nt NT seq  +upstreamnt  +downstreamnt atgagctacacgcgcgaaaccgaccatggaaccccgcccgccatatcgaccggcaggagc gtgaccctcaccatcgacggcgataccgtgacgatgccggaaggcacgtcgatcatgcgg gcggcctcgctgaccggctgttcgatccccaggctgtgcgcgaccgacaatgtcgaaagc ttcggttcctgccgcctctgcctggtcgaagtggaaggacgcaacggctatcccgcatcc tgcaccacgccgattgccgagggcatggtggtgcggacgcagagcgagcggctgaagcag ttgcggcgcggggtgatggagctgtacatctcggaccatccgctcgactgcctgacctgc ccggccaatggcgattgcgaattgcaggagcaggcgggggccgtgggcctgcgcgacgtg cgctacggctatgacggcgcgaccaatatggggcaggtgaaggaccagtcgaacccctat ttcgacttcgatcccagcaaatgcatcgtctgctcgcgctgcgtgcgcgcctgcgacgag gtgcagggcacattcgccctgaccatcgaagggcggggcttcgactccagggtttcgcca tcgcaggggcaggatttcctctcgtccgaatgcgtgtcctgcggcgcctgcgtccaggca tgcccgaccgcgaccctgaccgagaagaaggtggtggagaccggcactccggatcgcgca gtcgtcaccacctgcgcctattgcggcgtcggctgcaccttccgcgcggagatgcggggc gaggaactggtccgcatggtgccgtggaaggacggcaaggccaatcgcgggcatagctgc gtcaagggccgcttcgcctggggctatgcccagcaccgcgaccgtatcctcaaacccatg atccgcgcctccgtgaacgaaccctggcgcgaagtgtcgtgggaggaggccatcgcccat accgccagcgagttccggcgcatccaggccaaatatggcacgcgcagcatcggcggcatc acctccagccgctgcaccaatgaggagaccttcctcgtccagaagctgatccgccagggt ttcggcaacaataatgtcgatacctgcgcgcgggtctgccattctcccaccggctatggg ctgaagacgaccttcggaacctcggcgggcacgcaggatttcgacagcgtgatgcaggcc gacgtgatcctggtcatcggcgccaatccgaccgacggccatccggtcttcgccagccgc atgaagaaacggctcaggcagggcgccaagctgatcgtcatcgatccccggcggatcgat ctggtgaagtcgccccatgtcgaggcttcccatcatctgccgctccggcccggcaccaat gtcgccatgctgacggcgctggcgcatgtgatcgtgacggaaaagctctatgacgaggcg ttcatccgcgatcgctgcgattgggatgaatttgccgagtgggccgatttcgtttccgaa ccgcagcgctcgcccgaagcggtcgagccccttaccggcgtcgaggcgacggaggtccgc gccgccgcccggctttatgcgaccggcggcaatggcgcgatctattacggactgggcgtg accgagcacagccagggcagctccaccgtcatggccatcgccaatctcgccatggcgacc ggcaatatcgggcgcgaaggcgtgggcgtgaatcccctgcgcgggcagaataatgtgcag ggcgcctgcgacatgggcagcttcccgcacgaattttcgggttatcgccatgtctccgac gatgcggtgcgcggccagttcgaacaggcctggggcgtcacgctggatgcggagccgggg ctgcgcatccccaacatgctcgatgcagcgacggacggcacgttcaagagcatcttcatc cagggcgaggatattctccagtccgatcccaacacccatcatgtcgcggcggggcttgcc gcgatggaatgcgtcgtcgtgcaggacctgttcctcaatgagacggccaattatgcccat gtcttcctgcccggatcgaccttcctggaaaaggatggaaccttcaccaacgccgaacgc cgcatccagcgcgtgcgcagggtgatggcgccgctcaacggccatgccgattggcagatc gtccagttggtcgcgcaggccatggggctgggctggtcctatgcgcacccttccgaaatc atggacgagatcgccgcgctgacgcccaccttcgcgggcgtgcattatgaccggctggat gcagagggatcgctgcaatggcctgccaatgatgcagcgcccgacggcacgccgaccatg catatcggcggcttcgtgcgggggaggggcaagttcgtcgtcaccgactatgtgccgacc gatgagaagaccgggccgcgcttcccgctgttgctgaccaccgggcgcatcctcagccaa tataatgtcggcgcgcagacgcggcggaccgcgaacgcggcctggcatccggaggatcgg ctggaaatccatcccaacgacgccgaaaatcgcgggatcagcgatggcgactgggtctcg ctcaagagcagggccggggaaaccagcctgcgcgccctgatcacggagcgggtcgcgccg ggcgtggtctacacgaccttccatcatcccgacacgcaggccaatgtcatcaccaccgac tattcggactgggccaccaattgcccggaatataaggtgacggcggtccaggtcatgcgc tccaacggaccgagcgactggcagcgcgactatgcggagcaggcacggcacagcaggcgc attgcgcccttggaagcggccgaatag

Sphingobium sp. RSMS: EGM87_21595 Help Entry EGM87_21595       CDS       T10811                                  Name (GenBank) formate dehydrogenase   KO K00124   formate dehydrogenase iron-sulfur subunit Organism sprs  Sphingobium sp. RSMS Pathway sprs00630   Glyoxylate and dicarboxylate metabolism sprs00680   Methane metabolism sprs01100   Metabolic pathways sprs01120   Microbial metabolism in diverse environments sprs01200   Carbon metabolism Brite KEGG Orthology (KO) [BR:sprs00001]  09100 Metabolism   09101 Carbohydrate metabolism    00630 Glyoxylate and dicarboxylate metabolism     EGM87_21595   09102 Energy metabolism    00680 Methane metabolism     EGM87_21595 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Complex1_51K NADH_4Fe-4S SLBB_2 SLBB HicA_toxin Motif Other DBs NCBI-ProteinID:  UXC92901 LinkDB All DBs Position 2:complement(813218..814798) Genome browser AA seq 526 aa AA seqDB search MKRVYVSRDMASVALGADEVARAFEAAGCEVVRTGSRGLFSIEPLVEVESEGKRIGFGPV GPADIAAVLDGSHEARLGDVAALPFFAGQQRFTFARCGVIDPLSLKDYAEHGGWRGLETA RGMTPQAVVDAVKASGLRGRGGAGFPTGIKWQTVLDAVSDAKFIVCNADEGDSGTFADRM LVEGDPFCLIEGMTIAGHAVGASHGYIYIRSEYPFAIAVMREAIQLSAERTAPFTLEVRV GAGAYVCGEETALLESIEGKRGQVRAKPPLPALAGLFGRPTVINNLLSLAAVPFILAEGA KAYADVGFGRSRGTIPVQLAGNVKHGGLYEIGFGITLGELVNDIGGGTASGRPVRAVQVG GPLGAYFPPSMFDLPFDYEAFAQAGGLIGHAGITVFDDSVDMAHMARFAMEFCAVESCGK CTPCRIGSTRGVEVMDRIIAARDSATVVQAGRNWEGHLQKALNSRTPDRIDTGLEAQTAL LRDLCDTMKHGSLCALGGFTPYPVLSALDHFPEDFGAKSPVKEAAE NT seq 1581 nt NT seq  +upstreamnt  +downstreamnt atgaagcgggtctatgtcagccgggacatggcctccgtcgccctcggcgcggatgaggtc gcccgcgccttcgaagccgcaggatgcgaggtggtgcgcaccggcagccggggactcttt tccatcgagcctttggtcgaggtcgaaagcgaggggaagcggatcggcttcgggccggtc ggccccgccgacatagcggccgtactggacggcagccatgaagcgcggctgggcgacgtg gcggccttgcccttcttcgccgggcagcaacgcttcaccttcgcgcgctgcggagtgatc gatccgctcagcctgaaggactatgccgaacatggcggctggcgcgggctggaaacggcg cgcggcatgacgccccaggcggtggtggatgcggtgaaggcatccggcctgcgcgggcgg ggaggagcgggctttcccaccggcatcaaatggcagacggtgctggatgcggtttcggac gccaagttcatcgtctgcaatgccgatgaaggcgacagcggcacctttgccgaccggatg ctggtcgaaggcgatcccttctgcctgatcgaaggaatgacgatagccggtcatgccgtg ggagcaagccacggctatatctatatccgcagcgaatatcccttcgccatcgccgtcatg cgggaagcgatccaactctccgccgaacggaccgcgcctttcacgcttgaagtgcgtgtc ggggcgggcgcctatgtctgcggcgaggaaaccgcgttgcttgaaagcatcgagggcaag cgggggcaggtgcgggcaaagccgcctctcccggcgctggcggggctgttcggacgaccg acggtgatcaacaatctgctcagcctggcggcggtccccttcatcctggcggaaggggcg aaggcctatgcggacgtcggcttcggccggtcgcgcggcacgatcccggtgcagcttgcg ggcaatgtgaagcatggcggcctctatgagatcggcttcggcatcacgctgggcgaactg gtgaacgacatcggcggcggcactgccagcgggcggcccgtccgcgcggtgcaggtcggc ggcccccttggggcttatttcccgcccagcatgttcgacctgcccttcgattatgaggct ttcgcgcaggctggcgggctgatcggccatgccgggatcaccgtgttcgacgacagcgtc gacatggcgcacatggcccgcttcgcgatggaattctgcgcggtcgaaagctgcggcaaa tgcaccccttgccggatcgggtcgacgcggggcgtcgaggtgatggaccggatcatcgcg gcgcgggacagcgcgaccgtcgttcaggccggacgcaactgggaggggcatctccagaaa gcgctcaattcccgcacgcccgaccggatcgataccgggctggaggcgcagacggccttg ctgcgcgacctttgcgacacgatgaaacatggctcgctctgcgcgctgggcggtttcacg ccctatccggtgctgagcgcgctcgatcatttccccgaggatttcggtgccaagtcgccg gtgaaggaagctgcggaatga

Sphingobium sp. RSMS: EGM87_21600 Help Entry EGM87_21600       CDS       T10811                                  Name (GenBank) formate dehydrogenase subunit gamma   KO K00127   formate dehydrogenase subunit gamma Organism sprs  Sphingobium sp. RSMS Pathway sprs00630   Glyoxylate and dicarboxylate metabolism sprs00680   Methane metabolism sprs01100   Metabolic pathways sprs01120   Microbial metabolism in diverse environments sprs01200   Carbon metabolism Brite KEGG Orthology (KO) [BR:sprs00001]  09100 Metabolism   09101 Carbohydrate metabolism    00630 Glyoxylate and dicarboxylate metabolism     EGM87_21600   09102 Energy metabolism    00680 Methane metabolism     EGM87_21600 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  2Fe-2S_thioredx Motif Other DBs NCBI-ProteinID:  UXC92902 LinkDB All DBs Position 2:complement(814795..815262) Genome browser AA seq 155 aa AA seqDB search MQQEDATRLIEDWTRTHGRTRDRLLPLLHMLQEEIGFIDDAAIPVIATALNLSRADVHGV VTFYHDFRRTPAGRHVVKLCRAESCQARGATAIEKVATDRLGVPMGQTRPDGQVTLEPVY CLGLCAVGPNALVDGRPVARIDAATLDRIAQEIAA NT seq 468 nt NT seq  +upstreamnt  +downstreamnt atgcagcaggaagacgcaacgaggctgatagaggactggacccggacccatggccgcacc cgcgaccgcctgctcccgctgctgcacatgttgcaggaggagataggctttatcgatgat gcagccatccccgtcatcgccaccgcactcaacctcagtcgcgcagacgttcatggagtt gtgaccttctaccatgatttccgccgaacccccgccggccggcatgtcgtaaaactctgc cgcgccgaaagctgccaggcccgcggcgccacggcaatcgagaaggtcgcaaccgatcgg ctgggcgtccccatgggccagacgcgcccggacggacaggtcacgctggaacccgtctat tgcctcggcctgtgcgccgtcggtcccaacgcccttgtcgacggaaggccggtcgcgcgg atcgatgcggccaccctggaccggatcgcgcaggagatcgcggcatga

Sphingobium sp. RSMS: EGM87_21585 Help Entry EGM87_21585       CDS       T10811                                  Name (GenBank) formate dehydrogenase subunit delta   KO K00126   formate dehydrogenase subunit delta [EC:1.17.1.9] Organism sprs  Sphingobium sp. RSMS Pathway sprs00630   Glyoxylate and dicarboxylate metabolism sprs00680   Methane metabolism sprs01100   Metabolic pathways sprs01120   Microbial metabolism in diverse environments sprs01200   Carbon metabolism Brite KEGG Orthology (KO) [BR:sprs00001]  09100 Metabolism   09101 Carbohydrate metabolism    00630 Glyoxylate and dicarboxylate metabolism     EGM87_21585   09102 Energy metabolism    00680 Methane metabolism     EGM87_21585 Enzymes [BR:sprs01000]  1. Oxidoreductases   1.17  Acting on CH or CH2 groups    1.17.1  With NAD+ or NADP+ as acceptor     1.17.1.9  formate dehydrogenase      EGM87_21585 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  FdsD Phage-A118_gp45 Motif Other DBs NCBI-ProteinID:  UXC92899 LinkDB All DBs Position 2:complement(810128..810364) Genome browser AA seq 78 aa AA seqDB search MSDENEVMSTEDRLIYMANQIARNVAALGEAEAVAMTADHIRAFWDPAMKQRIALLAAAR PGALSPIAAAAVGWVVAP NT seq 237 nt NT seq  +upstreamnt  +downstreamnt atgagcgatgaaaatgaagtcatgtcgaccgaggaccgcctgatctacatggcgaaccag atcgcccgcaatgtcgcggcgttgggcgaggcggaagctgtcgccatgacggcggaccat atccgcgccttctgggatccggcgatgaagcagcgcattgccttgctggcggctgcgcgt cccggcgcactgtctcccatagccgccgccgctgtcggctgggtcgtggcgccttga

DBGET integrated database retrieval system