Sphingobium sp. RSMS: EGM87_23165
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Entry
EGM87_23165 CDS
T10811
Name
(GenBank) PAS-domain containing protein
KO
K20975
two-component system, sensor histidine kinase [EC:
2.7.13.3
]
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EGM87_23165
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sprs01001
]
EGM87_23165
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sprs02022
]
EGM87_23165
Enzymes [BR:
sprs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
EGM87_23165
Protein kinases [BR:
sprs01001
]
Histidine kinases
Other
EGM87_23165
Two-component system [BR:
sprs02022
]
Other families
SagS-HptB-HsbR (swarming activity and biofilm formation)
EGM87_23165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
Response_reg
HisKA
PAS_8
PAS_4
HATPase_c_2
PAS
Flagellin_C
Motif
Other DBs
NCBI-ProteinID:
UXC93200
LinkDB
All DBs
Position
2:complement(1132441..1134648)
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AA seq
735 aa
AA seq
DB search
MTDAALSSAELEALREENRKLRKINAALIDRVERSSDMAGNAFSMFETAISLEAMVRERT
VQLEDALAKLAEANADLASAHGHADAARMRLRDAIDSINEGFVLFDAEDRLVLYNEAYLG
FWPEIADHIREGMSFDEIAKLAAAHHRPVGQDRWVSDRLARHSVAEGGHVQALSDGRWVQ
INELRTSEGGIVGIYTDITEVKAEDARDRARELAERNIVLQATLDNLSEGVCLFDAEGRL
AAWNEALQRLLELPEDWAQERDSHAALLDWCRGNLGMDDRGCLDRGGARHRSELVHAGGR
SFEIRSNAMERGGQVIGFTDVTDMLRAQAALRETAETLERRVAERTSELEAEVAERRQIE
AQLMDAKTAAEKANLSKTSFLAAASHDLLQPLNAARLFVAALGDRRLALPTRALVNQTST
ALDSVEDLLEALLEISRLDAGAIQPEISDFRIDRLLDTLRTEFAPMARSAGLVLAVETAP
VWVRSDIRLLRRILQNFLSNALRYTQRGSVRVACVAEADGIRLSVADSGPGIPVDKQQLI
FEEFRRLDTPGGRGAGGKGLGLAIVRRASDMLRHEVTLESVPGQGATFSIRVPQGEAVVE
EGDGGSAPRSDRSMRGLKVLVVDNERAIQTGMSTLLGGWGCTVATAGGFAEAVAAFSEGE
APDVILVDYHLNDGETGDAVIERLHGHFGRAVPSVMISADRGEALKARMDGWGIPLLGKP
VKPAQLRALLRTMLK
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcggccctctcttccgccgaactggaggcgttgcgggaagagaaccgcaag
ttgcgcaagatcaatgcggcgctgatcgaccgggtcgaacggtcgagcgacatggccggc
aacgccttttcgatgttcgagaccgcgatctcgctggaagccatggtgcgcgagcggacc
gtgcagctcgaagacgcgctggcgaagctggcggaggccaatgccgacctcgcctccgcc
catggccatgcggacgcggcgcggatgcggctgcgcgacgcaatcgattcgatcaacgaa
ggcttcgtcctgttcgacgcggaggatcggctggtcctctataacgaggcctatctgggt
ttctggccggagattgcggaccatatccgcgagggcatgagcttcgacgagatcgccaag
ctggcggcggcgcatcaccgcccggtgggacaggaccgatgggtgtcggaccggctggcg
cgccatagcgtggcggagggcgggcatgtgcaggcgctgtccgacgggcgctgggtgcag
atcaacgaactgcgcaccagcgagggcggcatcgtcggcatctataccgacatcaccgag
gtgaaggcggaggatgcccgcgaccgcgcgcgggaactggccgagcgcaacattgtgctg
caggcgacgctcgacaacctctccgaaggcgtgtgcctgttcgatgccgaggggcggctg
gcggcgtggaacgaggcgctgcaacggctgctggaactgccggaggactgggcgcaggag
cgggatagccatgccgcgctgctggactggtgccggggcaatctggggatggacgacagg
ggctgcctcgaccggggcggggcgcgccatcgcagcgaactggtccatgccggggggcgc
agcttcgagattcgcagcaacgccatggagcggggcgggcaggtgatcggcttcaccgac
gtgaccgacatgctgcgcgcgcaggcggcgctgcgcgagacggcggagacgctggagcgg
cgggtggcggagcgcacctccgaactggaggcggaggtggccgagcggcgccagatcgag
gcgcagttgatggacgccaagacggcggcggagaaggcgaacctgtccaagaccagcttc
ctggcggcggccagtcatgatctgttgcagccattgaacgcggcgcggctgttcgtcgcg
gcgctgggcgaccggcgattggcgctgccgacgcgggcgctggtcaaccagacgtccacc
gcgctggattccgtcgaggatctgctggaggcgctgttggagatcagccgcctcgacgcg
ggcgcgatccagccggagatcagcgatttccgcatcgatcggctgctcgatacgctgcgg
acggaattcgcgccgatggcgcgttcggcggggctggtgctggcggtggagacggccccg
gtctgggtccgctccgacatccggctgctgcggcggattctccagaatttcctgtccaat
gcgctgcgctacacccagcgcgggtcggtgcgcgtcgcctgcgtcgcggaggcggatggg
ataaggctgagcgtcgccgacagcggtcccggcatccccgtcgacaagcagcaactgatc
ttcgaggaattccgccgcctcgacacgccggggggcaggggggcgggcggcaaggggctg
ggcctcgccatcgtccgccgggcgagcgacatgctgcgccatgaagtgacgctggaatcg
gtgccggggcagggcgcgaccttctccatccgcgtgccgcagggcgaggcggtggtggaa
gagggcgatgggggcagcgcgccgcgcagcgaccggtcgatgcgcgggctgaaggtgctg
gtggtcgacaatgagcgggcgatccagaccggcatgtcgaccctgctgggcggatggggc
tgtaccgtggcgacggccgggggattcgcggaggcggtcgccgccttttcggaaggcgag
gcgcccgatgtcatcctggtcgactatcatctgaacgacggcgagacaggggatgccgtg
atcgagcggttgcacggccatttcgggcgggcggtgccgtcggtgatgatctccgccgac
cggggcgaggcgctgaaggcccggatggacggctggggcattccgctgctgggcaagccg
gtgaagcctgcgcaactgcgcgccttgctgcgcacgatgttgaaatag
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