Sphingobium sp. RSMS: EGM87_23845
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Entry
EGM87_23845 CDS
T10811
Name
(GenBank) LuxR family transcriptional regulator
KO
K19731
LuxR family transcriptional regulator, quorum-sensing system regulator CciR
Organism
sprs Sphingobium sp. RSMS
Pathway
sprs02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sprs00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EGM87_23845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sprs03000
]
EGM87_23845
Transcription factors [BR:
sprs03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
EGM87_23845
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Paralog
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UXC93741
LinkDB
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Position
pRSMS1:121373..122116
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AA seq
247 aa
AA seq
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MIGLGQVQEFCAVAATIKDSRALADLMAEITGAMGFRYFALDHHIDLKPAVSSVHVVDYP
PDWVERFQARRLYASDPIHRASHRTNVGFAWSAVQSLITLSAADRSILAEAHDAGLGDGF
TVPAHIPGEVNGSCSFAMGAGDVLDQRQLPLVQLIGSFAFEAARRLSRQTLAPCEGPSLT
ERQAECVALVARGKTDWEISQILGIGQETVIQHVKDARDRYGVTKRTLLAIRALFDGQIS
FADVFGR
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgatcgggcttgggcaagttcaggaattctgcgcggttgccgcgacaatcaaggatagc
cgagcactcgccgacctgatggccgagatcacgggcgcaatgggttttcggtactttgcc
ctggaccaccatatcgacctcaagccagcggttagctctgtccatgttgtcgattatccg
ccggactgggtggagcgtttccaggcgcgccgcctctatgccagtgacccaatccaccgt
gccagccatcgcaccaatgtcggctttgcctggtcggcggtgcaatccctcatcacgctc
agcgctgccgatcggtcgatcctggcggaggcgcacgacgccggactgggcgatggtttc
acggttcctgcccatattcctggtgaggtgaatgggtcgtgctcattcgccatgggggcg
ggcgatgtgctcgatcaacgtcagctcccgctcgtccagctcattggcagcttcgcattc
gaagccgcgcgcaggctttcccggcaaaccctagctccgtgcgaaggcccgagcctgact
gagcggcaggccgaatgtgtggcgctggtagcacgcgggaaaaccgactgggagattagc
caaatcctcggcattgggcaggaaacggtgatccagcatgtaaaggatgcgcgcgaccgc
tacggcgtgacgaagcgcacgctgctggcgatccgcgcattgttcgatggacagatcagc
ttcgcagatgttttcggccgatga
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