KEGG   Sphingobium sp. RSMS: EGM87_23865
Entry
EGM87_23865       CDS       T10811                                 
Name
(GenBank) lytic transglycosylase domain-containing protein
  KO
K03194  type IV secretion system protein VirB1
Organism
sprs  Sphingobium sp. RSMS
Pathway
sprs03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sprs00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EGM87_23865
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sprs02044]
    EGM87_23865
Secretion system [BR:sprs02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   EGM87_23865
SSDB
Motif
Pfam: SLT DUF4148
Other DBs
NCBI-ProteinID: UXC93745
LinkDB
Position
pRSMS1:124147..124815
AA seq 222 aa
MILDVASLVALAGSCAPSVAPETLISIVHTESRFNTLAIGVNSPGVRKPAPATRAQAIAV
ARRLIRQGYNIDLGLGQINSANLGWLGLSVEDAFEPCRNLAAAARVLTTNYQSVAHSAQS
SDHAIATALSLYNTGDRRRGFRNGYVARVYASASTIIPLIRGRPTAPVLPARVQLADAAI
AKPQPYGLAATQAAGWNTAADARQASLMVFGDGTTSQKGQHP
NT seq 669 nt   +upstreamnt  +downstreamnt
atgatcctcgacgtcgccagtcttgtcgcccttgcaggctcatgcgcaccgagcgtggcg
cctgagacgctgatctcgatcgttcacacggaaagccggttcaacacgcttgcgatcggg
gttaacagtccgggtgtgcgcaagccggcgccggcgacgagagcacaggcgattgccgta
gcgcgtcgcctcattcgccaaggctacaacatcgacttgggcttggggcagatcaacagc
gccaacctcggatggctcggtctttcggtggaggatgccttcgagccgtgccgcaacctt
gccgccgccgcgcgggtgttgacgaccaactatcagtcggtggcgcactccgcccagagt
tcggaccatgcgatcgcaacagcgctctcgctctacaataccggcgatcggcggcgcggc
tttcgcaatggttatgtcgcccgggtctatgccagcgcgtcgaccatcatccccctgatc
cgcggcaggccaacagcgccggtcctgccggcgcgcgtccagcttgccgacgcggcgatc
gccaaaccgcaaccctatgggctcgcggcgacgcaggcggccggttggaacaccgccgcc
gatgcccggcaagcctcgctcatggtcttcggggacgggacaacttctcagaaaggacag
catccatga

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