KEGG   Sphingobium sp. RSMS: EGM87_24100
Entry
EGM87_24100       CDS       T10811                                 
Name
(GenBank) strawberry notch family protein
  KO
K26273  protein strawberry notch
Organism
sprs  Sphingobium sp. RSMS
Brite
KEGG Orthology (KO) [BR:sprs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:sprs03036]
    EGM87_24100
Chromosome and associated proteins [BR:sprs03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    EGM87_24100
SSDB
Motif
Pfam: AAA_34 Helicase_C_4 ResIII Helicase_C
Other DBs
NCBI-ProteinID: UXC93789
LinkDB
Position
pRSMS1:complement(183948..188147)
AA seq 1399 aa
MATQPLALTLPLDDPARTAAQGIADRLSEGRSVARNDLLAGMTSAFGGSSADGSWSLRDA
YDVLELAQILHLKNTTLPADANVRLAQLIAMTAALPTHSVRSETQVAFQQFSTPAPIGFL
AARAAAITARDIVLEPSAGTGLLAVHGHFAGARLLLNEIDAWRARLLRHALPEGTLSTHD
GELIDDMLDPQLVPSVVLINPPFSRSQGRGRDRHAALRHLRSALLRLAPGGRCAVILPDR
IETGDADWLHATAGAHLRLHLDLPPHAYAKHGTGQAVQLILLEKGGAGDCVPRQTCTTFG
AALAAIDAMATPCAPTPQPISRPSGLFRSLTRRTRPVSSRVAVTLPTTRAVVYHRLDAPA
PAGEPQGIYLPYRPSRLLIADAREHPSALVESQAMGSIPAPPVAYEPVLPARILDDGLLS
DAQLETLIYAGAAFERDLPGRFVSSEEGLSLSPAEAGNAYRTGFFLGDGTGAGKGRQVAG
VILDQWLRGNRRHLWISKSETLIEDARRDWSALGGLPLDIQHLNQWKLGTPIALGDGILF
LTYATLRSNRGDRGTRLRQLIEWMGEDFSGVIVFDEAHEMAGVAGGEGRFGATKGSEQGI
AGVRLQNLAPRARILYASATGASDVNNLAYATRLGLWGPQTAFADRRAFVESLRRGGIAA
MELIARDLKAQGLYAARALSFAGVEYDILEHRLSEEQIAVYNAYADAWAIIHNNLQAALA
ATRVTDGFSGATYNSGAKAAALSIFESTKQRFFGQILLSMKLPSLIPAIAADLARGDCAV
VQLVSTAEAMLDRALANLSPEERAWLDIELSPREFLVDYLTAAFPVRQMRIYTDDSGTVR
SEPMIDEAGQPVLCREAIAMRDQLLEQLCALPVIGSALDHIIGHFGTEAVAEVTGRSRRI
IVDADGRQRIERRSARTNLAETDIFMRGEKRILIFSDAGGTGRSYHASLDTPNQSRRIHY
LLEPGWRADAAIQGLGRTHRTHQACPPLFRPVSTDCRGERRFISTIARRLDSLGALTRGQ
RQTGGQGLFDPRDNLESDFARESLDQWFRLLFQGKLQSVRFDQFQSLTGLNLAGEGGGLT
ETLPTIQRWLNRILALRIDLQNAIFDEYLGLIEARVEKAREAGTLDLGVETIAADRISIL
DRTVIRRDPVSGAETEILRIETEERYRPLTLERAHWLLADPEARGLINPRSGKAAICRPT
FSLTDEEGRTVRRYELVRPTRTERHRQDLFAETHWTDVDRASFDEAWQAECDAMAAQTRT
QIIYLVTGLLLPVWGKLPDDHVQVWRLTSDDGQSLLGRLIPAPLVERIASAFGIAAHVAI
DLGARVEHVRTSGEIMPIGSLRLKRALVAGDQRLELLDWKSDALPRLKAAGCFTEIIQHR
TRLFVPPSRAVEILGEIAG
NT seq 4200 nt   +upstreamnt  +downstreamnt
atggccacacaacccctcgcgctcacgctgccgctcgatgatcccgcccggaccgctgct
caaggcatagccgaccggctgtccgaaggccgttcggttgcacgtaacgacctccttgcc
gggatgacctccgccttcggtggctcgagcgcggatggctcatggtcattgcgcgacgcc
tatgatgtgctcgaactcgcgcagatcctccatctgaagaacacaacactcccggcagat
gcgaatgtgcggctcgcccagctgatcgccatgacggcggcgcttccgacgcacagcgtg
cgtagcgaaacgcaggtcgcgttccagcaattctcgacaccggcaccgatcggcttcctt
gccgccagggcagccgcgatcacggcacgcgatatcgtgctcgagccctcggccgggacc
gggctcttggccgtacacggtcattttgccggcgctcgccttctcctcaatgagatcgat
gcctggcgcgcgcgtttgctgcgtcatgcccttcccgagggcacattgagcacgcatgac
ggcgaattgatcgacgacatgctcgatccgcaactggtgccgagcgtcgtgctcatcaac
ccgcccttctcgcggagccagggacgggggcgcgaccgccacgctgcgcttcgccacctg
cgctccgcgctcttgcgcctcgcaccaggcgggcgctgcgccgtcattcttcccgatcgc
atcgagacaggggacgcggattggctgcacgccaccgcgggcgcgcatctccggctgcat
ctcgacctgccgccccatgcttatgccaagcacggcaccgggcaagcggttcagctcatt
ctcctcgaaaagggcggggcaggggattgcgtcccacgccagacctgtacgacgttcggc
gctgcgctcgcggccatcgatgcgatggcgaccccgtgcgcccccacgccgcaaccgatc
tcccgccccagcggattgttccggagcctcacgcggcggacccgccccgtaagctcgcgt
gtggcggtgaccctgcccacgacccgcgcggtcgtctatcaccgtctcgacgcgccggcg
cccgcgggcgaaccgcaagggatttacctgccctatcggccgagccgtctgctaattgcc
gatgcccgtgagcacccaagcgcgctggtcgaatcgcaggcaatgggatcgattcccgca
cccccggtcgcttatgaacccgtgctgccggccaggatcttggacgacggcctgctctcg
gacgcgcagctcgaaacgctgatctacgctggcgcggcgttcgagcgcgaccttccgggc
cggttcgtatctagcgaggagggtctttcgctgtcgccggcagaggccggtaacgcctat
cggaccggctttttccttggcgatggcacgggcgccggcaaggggcggcaggtggcgggc
gtcatcctcgaccagtggttgcgcggcaaccgccgccacctctggatatccaagagcgag
acgctgatcgaagacgctcgccgcgactggtcggcgcttggcggcttgccgctcgacatc
cagcatctcaaccagtggaagctcggcaccccgatcgcgctgggcgatgggatcctcttc
ctgacctatgccaccctgcgctccaaccgcggtgacaggggcacgcggctgcgccagctg
atcgaatggatgggtgaggatttcagcggcgtcatcgtcttcgacgaggcgcatgagatg
gccggggtggccggtggcgagggccggttcggcgccacgaaagggtcggaacagggcatc
gccggcgtccgcctgcaaaatctcgctccgcgcgcccggattctctacgcctcggcgacg
ggcgcctcggacgtcaacaacctcgcttatgcgacacgcctcggattgtggggaccgcag
acggccttcgccgaccggcgggccttcgtggaatcgcttcgccgcggcggcatcgcagcg
atggagttgatcgcccgcgacctcaaggcgcagggcctctatgccgcgcgggcgctcagc
ttcgccggcgtcgaatatgacatcctcgagcatcggctcagcgaagaacagatcgccgtc
tacaatgcctatgccgatgcctgggcgatcattcacaacaatctgcaggccgcgctcgcc
gccacgcgcgtcaccgacggcttcagcggtgccacctataatagcggcgcgaaggccgcg
gcattgtcgatcttcgaatcgaccaagcaacgcttcttcggccagatcctgctgtcgatg
aagctgccgtcgctgatcccggcgatcgccgccgatctcgcgcgcggcgactgcgccgtc
gtccagctcgtgtcgacggcggaagccatgctcgaccgtgcccttgccaacctgtccccc
gaggagcgcgcctggctcgacatcgagctgtctccgcgcgaattcctggtcgactatctg
acagcggcctttccggtgcgccagatgcgcatctataccgacgatagcggcacggtgcgc
tcggaaccgatgattgacgaggcgggacagcctgtgctgtgccgggaagcgatcgccatg
cgcgaccagctcctcgagcagctttgtgcgctaccggtgatcggctcggcgctcgatcac
atcatcgggcatttcgggacggaggcagtggccgaggttacgggtcgcagccggcggatc
atcgtcgatgccgacggccgtcagcggatcgaacggcgcagcgcgcgcacgaacctcgcg
gagaccgacatcttcatgcgcggcgaaaagcgcattctgatcttttccgacgccggcggg
acggggcggagctaccacgccagcctcgacacgcccaatcagagccgccgcatccactat
ctgctcgagcccggttggcgcgcggacgcggcgatccaggggctaggccgcacgcatcga
acccaccaagcctgcccgcccctgtttcggcccgtttccaccgattgccgcggcgaacgg
cggttcatctcgaccatcgcccggcgcctcgacagcttgggcgccctgacccgcggccaa
cgccagaccggcgggcagggacttttcgacccccgcgacaatctggagtccgacttcgcg
cgggaatcgctcgaccagtggtttcgcctactgttccagggaaagctccaatcggtgcgc
tttgatcaattccagtcgctcaccggtttgaacctggccggggagggtggggggctcact
gagaccttgcccacgatccagcggtggttgaaccgcatcctggcactgcgcatcgacctg
cagaacgcgatcttcgacgaatatctgggcttgatcgaagcacgggtggaaaaggcccgc
gaggctggcaccctcgatcttggcgtcgaaacgatcgcggccgaccgaatttcgatcctc
gaccgcacggtgatccggcgcgatcccgtgagcggcgccgaaaccgagatcctgcgtatc
gaaaccgaggaacgatatcggccgctgaccctggaacgagcgcattggcttctggccgac
ccggaagcgcgcgggttgatcaacccgcgttccggcaaggccgccatttgccggccgacc
ttctcgctgacggacgaagaggggcggaccgtgcgccgctacgagctggtgcgtccaacg
cgcaccgaacggcaccggcaggacctcttcgccgaaacccattggaccgacgtggaccgc
gcgagcttcgacgaagcctggcaggccgaatgcgacgcgatggccgcgcagacgcgtacg
cagatcatctatctggtcacgggcctgctgctcccggtctggggaaagctgcccgacgat
catgtccaggtctggcggttgacgagcgatgacggccagtcgcttctcgggcgtcttatt
ccggcgccgctggtggagcggatcgccagcgcattcggcatcgccgcccatgtcgcgatc
gatctaggcgcgcgggtcgagcacgttcgcacctcgggcgagatcatgccgatcgggtcg
ctccggctgaagcgggccttggtcgccggcgaccaacgcctcgaattgctcgactggaag
tccgacgcccttcctcgtctcaaggcggcgggctgcttcaccgagatcatccaacaccgc
acgcggctcttcgtcccaccgagccgcgccgtcgagatccttggcgagatagcaggctga

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