Sphingobacterium sp. R2: VXM68_01885
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Entry
VXM68_01885 CDS
T10631
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VXM68_01885 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_01885 (priA)
Enzymes [BR:
sprz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VXM68_01885 (priA)
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VXM68_01885 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Zn_ribbon_PriA
Helicase_C
nSTAND3
DUF5839
Penicillinase_R
TrmB
Motif
Other DBs
NCBI-ProteinID:
XCY05710
LinkDB
All DBs
Position
complement(414085..416568)
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AA seq
827 aa
AA seq
DB search
MSNPQSTIFSERDTLFVDVVLPLALARTYTYRIPADWNDRVQLGVRVIVQFGRNKIYSAL
VKSISREAPKHYEAKYILDIIDENPIVNLTQFKLWDWLADYYMCSLGEVMQAALPAALKL
ASETKVVPSIADEFDRSTLSDKEYLIIEALEVAGELKVNDIVKLLGQKTVFPILKQLFDK
GIVLISEEITERYKPKTKAFLRLAPDFKNEDAKRALLDSLNRAPKQQDAVLAFMQLVKKT
EEITRPMLTEASGCGNGAITALIDKGVFEIKEKVVSRFQGEDIELDANFQFNENQQRAYD
EIKKSFEDKEVTLLHGVTASGKTQLYIRLIEQAIAAGKSALYLLPEIALTAQITARLKLH
FGDKLGVYHSKFNDNERAEVWHKVMKNEFQVVIGARSSVFLPFQDLGIIIVDEEHESSYK
QFDPAPRYHARDTAIYLGFLHQTKVLLGSATPSLESYYNAKAKKYGFVQLLERYGNAQLP
TIELVNIPEEGRKENMFSYFSGTLLKAIEEAVKNKEQIILFQNRRGHTTMIQCNTCGFVA
KCVNCDVSLTYHKSSNMMHCHYCGHVEPPLRVCPACGMPHIESKGFGTERVEEELELLMP
EIRIGRLDLDSTKGKYGFDKIITAFDEHEFDVLIGTQMVAKGLDFGRVSLIGVINADTII
NFPDFRSYERAFSLFSQVAGRAGRREAGGRVIIQSYTTKHRVLEQVVNNDYDDMFMTEIT
ERKNYLYPPFYRLIRIDIKHADFQKCYDSANRFASALRQQLGARVLGPEPPLVSRVRNNF
IQTITLKIERTNISIAKVKELIRSVLLDFEIDKSNTGVRVQVDVDPY
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatccacaatctacgatttttagtgaaagagatacgctgtttgttgatgtggtc
ttaccactagcgttagcaagaacatatacctatcgtattccggccgactggaacgatcgt
gtgcagctaggagtacgggtcattgtgcaatttggaagaaataagatctattcagccctt
gttaagtcaataagccgggaagcaccaaagcactatgaagcaaaatatattttggacatt
atcgatgaaaatccgatcgtcaatttgacgcagtttaaactttgggattggcttgccgat
tattatatgtgtagcttgggtgaagtgatgcaggcggcgctcccagcagcattgaagttg
gccagtgagaccaaagtggttccttcgattgctgatgagtttgatcgttctacgctctca
gataaggaatatcttattattgaagcactggaggtggctggcgaacttaaggtgaatgat
attgtgaaattgctggggcagaaaactgtttttcctattttaaagcaattatttgacaag
ggaatagtattgatttctgaagaaattaccgagcgatataagcctaagaccaaagcattt
ttacgtttggctcctgattttaaaaatgaagatgctaaaagagcgctactggatagtcta
aaccgcgcgccaaaacagcaagatgccgtattggcgtttatgcaacttgttaaaaaaacg
gaggagattacgcggccgatgttaaccgaggcctccggctgcggcaacggcgctattaca
gctttgattgacaaaggcgtttttgaaatcaaagagaaggttgtctctcggtttcagggg
gaagatatcgaattggatgccaattttcaatttaatgaaaatcagcaacgcgcttatgat
gaaatcaagaagtcatttgaggataaggaagtgacgctgttgcatggtgttaccgcttca
ggaaaaacacagctttatataaggctgatagaacaggcgatagctgcgggaaaatcagcc
ctctatctactgcccgagattgcgctgacagcgcagattacggcgcgcttaaagttgcat
tttggcgataaactgggggtgtatcactccaaatttaatgataatgaacgtgccgaggta
tggcataaagtgatgaaaaatgagttccaggtggtcattggagcacgttcgtcagttttt
ctcccctttcaggatttagggattatcatcgttgatgaagagcacgaaagctcctataaa
cagtttgatccagccccacgttaccatgctcgggataccgccatttatctaggctttctg
catcagaccaaggtacttttaggatcagccacaccttctctggaaagttattataatgcc
aaagcgaagaagtacggttttgtgcaactgctggaacgatacggtaatgcgcagttacca
actattgagctggtaaatatccccgaagaagggagaaaagaaaatatgttttcctatttt
tcaggtaccttgctcaaggccattgaagaagctgtaaagaataaggagcagattatttta
tttcaaaatagacgtggacatacgaccatgatccaatgtaatacctgtggatttgtcgca
aaatgtgtcaactgtgatgtcagcttaacctatcataagagttccaatatgatgcactgt
cattattgcggtcatgttgaaccaccattgcgggtatgtccagcctgcgggatgccacat
atcgaaagcaaaggattcggtacagaacgggtggaggaggagcttgagcttctgatgccg
gaaattcgaatcggccgtttggatctggattccacaaaaggcaaatatggatttgataaa
attatcacagcctttgatgagcatgaattcgacgtccttattggaacgcaaatggtagct
aaaggactcgattttggaagggtaagtctgattggtgttatcaacgcggataccattatc
aactttcctgattttcgttcctatgaacgtgctttttcactgttttcacaagttgcaggc
cgggctggtcgtcgtgaagctggaggccgggtgattatccaaagttatacaaccaaacat
agagtgcttgagcaggttgtcaataacgattatgacgatatgtttatgactgaaattaca
gaacgaaaaaattatctttatccacctttttaccgcctcatccgaattgatattaaacat
gctgattttcagaaatgctatgattcggccaatcgttttgcttcagcattgcgccagcag
ctgggagcgagggtattagggccggaaccaccattggtttcgcgggtgcgcaataatttt
atccagaccatcaccttaaagatagaacgtacaaatattagtattgcaaaggtcaaggaa
ttgatccgttcggttctgctggattttgaaatagataaaagcaatacgggcgtacgtgtt
caggtcgatgtggatccctattag
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