Sphingobacterium sp. R2: VXM68_02355
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Entry
VXM68_02355 CDS
T10631
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_02355
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
NiFeSe_Hases
TPR_9
TPR_6
Motif
Other DBs
NCBI-ProteinID:
XCY05804
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Position
complement(525247..526716)
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AA seq
489 aa
AA seq
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MKLNTIKYILLTSVFLFSGCSKYLDQEPDMRAQINTVDKVKRLVASAYPGRNSLAMAETY
SDNVEDKGVGGIYQPVPALYEWKDIIGDDTDSPTAYWNSCYEAIAAANHALAAIEKNNFG
DEVLAYKGEALVARAYCHFMLAIYFAKVYDFKSNASNDSPGIPYVKDPETVLIKQYDRGT
VKSTYDNIRKDLEEGLALLDQGNGLWDVPKYHFTPEAAHAFASRFYLFTGEWQKVVDNAN
KIFGGNYVGKLVPYNSTLKSLGFEAARTEITKATQPYNLLITETYSGYQRWWDNRYAMGI
SVVQNIYNSMTAAGAKLYNFGVSYGSPHYTTYIWKEFWYVTNPTANTGFPMLMVPVLMSD
EALLNRAEAYAELGNVNGALADLNLFARNRIDNYNSTDYAVTVAKSKQFFDVTDDKEALV
KTVLQFKHVGFMSMGLRWLDIIRKGITVKHNVIGSDERETFIELKPDDPRRVFQIPQEAK
LAGVELNPR
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaatacgattaaatatatattgctaacgtctgtttttctatttagcggatgt
agtaaatatctggatcaagagccggatatgcgtgctcagatcaatacggtagataaagtt
aaaagattagtggcatcagcctatcctggaagaaattcattggccatggctgagacctac
tctgacaatgtggaggacaaaggtgttggaggtatttatcaaccggtacctgctctttat
gaatggaaagatatcataggtgatgatacggactctcctacagcgtactggaattcctgt
tatgaagcaatagctgcagcaaatcatgccctagcagctatagaaaaaaataattttggt
gacgaggttctggcctataaaggagaagcacttgtggccagggcttattgtcattttatg
ttggcgatttactttgctaaagtatatgacttcaaatcgaatgcatcgaatgattctcca
ggaataccgtatgtgaaagatccagaaacggttttaataaagcaatatgatcgaggtaca
gttaagtctacatatgacaatatccgtaaagatttagaagagggattggccttattggat
caagggaatggtttgtgggatgttccgaagtaccattttacgcccgaagccgcgcatgct
tttgcttctcgtttttatctgttcacaggcgaatggcaaaaagtggtggataacgcaaat
aagatttttggaggtaattatgtaggcaagcttgttccttataactcaactttaaaatca
ttaggctttgaggctgcccgtacagagattaccaaggctacacaaccctataatttgttg
attacagaaacgtatagcggttatcagcgctggtgggacaatcgctatgctatgggaatt
agtgtcgtacaaaatatttataatagcatgactgctgcaggagcgaagctctacaatttt
ggtgtaagttatggctctccacattacacaacctatatatggaaggaattttggtatgta
acgaaccctaccgccaatacagggttccctatgttaatggttccggtactaatgtcagat
gaggctttattaaatcgagctgaagcttatgccgaattaggcaatgtaaacggggcacta
gctgatctcaatttatttgcacgcaataggatcgacaactacaattcaactgattatgct
gttacagtggctaaatcaaagcaatttttcgacgtcactgatgacaaagaagctcttgtt
aaaacagtattgcaatttaaacatgttggatttatgtccatgggactacggtggcttgac
attattcgtaaagggataacggtcaagcacaatgtcataggaagcgatgaacgagaaaca
tttattgaattaaaacccgatgatcctagaagggtattccaaatccctcaggaagctaaa
ttagcaggtgttgaactaaacccaagataa
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