Sphingobacterium sp. R2: VXM68_02605
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Entry
VXM68_02605 CDS
T10631
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_02605
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
TPR_2
TPR_1
TPR_12
Motif
Other DBs
NCBI-ProteinID:
XCY05849
LinkDB
All DBs
Position
complement(588587..590053)
Genome browser
AA seq
488 aa
AA seq
DB search
MKICYKLMMLCLLLPAASCQKWLDLKPQNEQVSDAYWTNKAEVEAVLGAAYVKLQGAVKT
MLVWGEGRGNTLSLSGYVDVDLLRLKSFSLLPTNNYAKWGEFYQIINYANMVIKYAPAVV
EKDPAFNQATMASFLSEAYFLRALSYFYIVRSFGEAPLILEPYMDDQQAYELSKSSKAQL
FDQIVQDLTVASNNGKEIWPTVWETKGRSTKWAIQALLADVYLWLGKYDEAIIACNTILQ
SGKYGLLQGTVNNKNNWFSIFNPGNSNEGIFEIQFDYTKNQTNKLMEIFGSNYNWIISNY
CVSLFTENAEDIRGAGASYETVAYKLWKYLGAEGNTTIPRPYSDQNWIIYRMADIYLMKA
EALIMKGESYYPQAVELITTIRSRASISRPLEAGSTELDILKALMDERAREFVGEGKRWF
DLLRVAQRDQYKYKEYLIEQVLLGVSGASTPVIRSLLLNENAHYLPIHADELKYNKLLVQ
NPYYENLN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatgctataaattaatgatgctgtgtctattgttgccagcggcatcttgtcag
aaatggcttgatctcaaaccacagaatgaacaggtcagtgatgcttactggaccaataaa
gctgaagtggaagctgtattaggtgcggcctatgtaaaattacaaggtgctgttaaaaca
atgttagtatggggcgaagggcggggaaatacactgagcttaagcgggtatgttgatgtc
gatcttttaaggttaaaaagcttctcgcttttgccgacaaacaattatgcaaaatggggt
gaattttatcagattatcaattatgccaatatggtgataaagtatgcccctgctgttgtt
gaaaaagatccagcgtttaatcaagcgactatggcatcttttttatcggaggcttatttt
ttgcgagcactcagttatttctacatcgttaggagttttggcgaggcaccattgatccta
gaaccctatatggacgatcagcaagcatacgaattgtcaaaatcgtccaaagctcagctc
tttgatcagattgtgcaggatctgacggttgcgtcaaacaacggtaaggagatctggcca
acggtttgggaaaccaaagggcgttccacaaaatgggctatacaagcgctgttggccgat
gtctacctctggctgggaaaatatgatgaggcgataatcgcctgtaataccatattgcag
tcaggaaagtacgggctcttgcagggaacagtcaataataagaataattggttcagtatt
tttaatcccggaaattccaacgaggggatttttgaaatccaatttgattataccaagaat
caaacaaataaattgatggaaatatttggctccaactataattggatcatatccaactat
tgtgtgtcgctatttacagaaaatgccgaagatatccgcggcgcaggggcatcctacgaa
acggttgcctacaagctttggaaatatttaggggcagaaggaaatacaacgattcctaga
ccctatagtgatcaaaattggatcatttatcggatggcggatatttacctgatgaaggcc
gaagcattgattatgaaaggagaaagttactacccacaagcggtagaattgatcactacg
attcggtcaagggcctcaatttcccgcccgctcgaagcagggagtaccgagttggatata
ttgaaagcattaatggatgagcgtgcacgggagtttgtgggagaaggaaaacgttggttt
gatctattacgtgtggcgcaacgagatcaatataaatataaagaatatttgatcgaacaa
gtattactcggcgtatcaggagcctcaacacctgtgattagatccctattgctcaatgag
aatgcgcactatttgccaatacatgccgatgaattgaagtataataaattgcttgtgcag
aacccgtattatgaaaacctaaattaa
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