Sphingobacterium sp. R2: VXM68_03360
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Entry
VXM68_03360 CDS
T10631
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00071
Fatty acid degradation
sprz00362
Benzoate degradation
sprz00650
Butanoate metabolism
sprz01100
Metabolic pathways
sprz01120
Microbial metabolism in diverse environments
sprz01200
Carbon metabolism
sprz01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
VXM68_03360
09103 Lipid metabolism
00071 Fatty acid degradation
VXM68_03360
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
VXM68_03360
Enzymes [BR:
sprz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
VXM68_03360
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
Pyr_redox_2
ApbA
Pyr_redox
NAD_binding_2
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
XCY05999
LinkDB
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Position
complement(816824..819253)
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AA seq
809 aa
AA seq
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MMNRNIRKVAVLGSGVMGSRIACHFANIGVEVLLLDIVPRELLPAEEAKGLTLESKIVRD
RIVNSSLETALKANPSPIYSKSFVKRIKTGNFDDNLKDIAHVDWIIEVVVERLDVKQSVF
ERVEQFRKPGTLITSNTSGIPIHLMTAGRSGDFKDHFCGTHFFNPPRYLPLLEVIPTPHT
KPEVVDFILKYGDKMLGKSVVLCKDTPAFIGNRIGVYSMLAVTHLVEPLGLTVEEVDKYT
GPAMGHPKSATFRTADVVGLDTLVNVANGLAQNAPEDEAKGVFELPPFISKMVENKWLGE
KTKKGFYEKVKAADGNSEILSLNLKTLEFGSQQKVKSATLEATKPVEDIRKRMKVYEQGS
DKAAELFRAMHYPLFEYVSRRVPEITDNFFRIDDAMRAGFGWELGPFEVWDALGVRETLA
KIKAEEKRLPGQNGEVAPWVHEMLDAGHESFYKIENGVRHYYDIATKSYKAIPGTEDLIV
LDHIRESKTIWKNTGVSIIDLGDGIINCEFHTKMNTIGGDVIQGLNKAIDLAEKEYRGLV
VSNDGKNFSAGANIGMIFMMAVEQDFDELNMAVRAFQNTSMRLRYSSIPVVVAPFQMTLG
GGCEFSMHADFVQAHAETYMGLVELGVGVIPGGGGTKEFTLRASEEFKEDQIVQNTLKDK
FLTIGQAKVSTSAYEAYELGYLQKDKFAITMNRARLLADAKAKALELADEGYVQPAPRND
IKVLGNQGLGIVYVGASSMREGNYISDYDRKISEKLGWVMCGGNLSSPTEVSEQYLLDLE
RKTFLELCAERKTLERIQFMLTKGKPLRN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacagaaatattagaaaagtggcagttctcggttcgggtgttatgggctcgcga
attgcttgtcattttgctaacattggtgttgaagtattactgttggatatcgttccacgt
gaacttctcccagcggaagaagccaagggcctcacgttggagagtaagatcgttcgggat
cgtattgtaaacagttctttagaaacggctttaaaagcaaatccatcgccaatttatagc
aagtcttttgttaaacgaatcaaaacaggaaactttgacgataatcttaaagatattgcc
cacgtggattggattatcgaggttgttgttgagcgacttgatgttaaacaatctgttttc
gagcgtgttgagcaatttcgaaaacctggaacattaattacttccaatacttctggtatt
cccattcatttaatgacagcgggtagaagtggggattttaaagatcatttctgtggtacc
cacttctttaatccaccccgctacctacctttattggaggttattccaacaccgcatacc
aaaccggaagtcgtcgattttattcttaaatacggtgacaagatgttaggtaaatctgtt
gtactgtgtaaagatacaccggcatttatcggaaatcgtatcggggtttattcgatgttg
gcagtcactcatctggtggaacccttggggttgacagtagaagaggtcgacaaatatacc
ggccccgcaatgggacaccctaaatcggcaacatttcgtacggcagatgtggtcggactg
gatactttggtgaatgttgctaatggactggcacaaaatgcgccagaagatgaagcgaaa
ggggtattcgaacttcctcctttcatcagtaaaatggtcgaaaataaatggttgggtgag
aaaaccaagaaagggttttatgaaaaagtaaaagctgccgatggtaattcggagattttg
tctctaaatctaaaaacactggaatttggctcacagcaaaaagtgaaatcagctactttg
gaagccaccaagcctgtggaggatatccgcaagcggatgaaagtctatgaacaaggaagc
gataaagcggcggaacttttccgtgccatgcattatcctttgtttgaatatgtatcccgc
cgtgtcccagaaataaccgataacttcttccgtattgatgatgccatgcgtgctggattt
ggttgggagttaggaccatttgaagtatgggatgctttaggtgttcgtgagacgttagct
aaaattaaggcagaagaaaaacgacttccaggtcaaaatggtgaagttgcgccctgggta
catgaaatgctagatgcaggacatgaatctttctataaaattgaaaatggtgtacgtcac
tattatgatattgcaaccaaatcttataaagctattccgggaacggaagatctgatcgta
ttggatcatattcgggaaagtaaaacaatctggaaaaatacgggggtttctattattgat
ctcggtgatggtattatcaattgtgaattccacacgaagatgaataccattggtggcgat
gtgattcaaggtttgaataaagcaatcgatcttgccgaaaaagaataccgcggattggta
gtttctaatgatgggaaaaatttctccgctggcgccaacatcggaatgattttcatgatg
gccgtagaacaggattttgatgaattgaatatggcagtccgtgcctttcaaaatacatcg
atgcggttgcggtactcatcaattccggtagtcgttgctccctttcaaatgaccctcggc
ggtggctgtgaattctccatgcatgctgattttgtgcaggctcatgccgaaacctatatg
ggcttggttgaacttggcgttggtgttattcccggtggcggtggaaccaaagaatttaca
ctacgtgcctcggaggaatttaaggaggatcagattgtgcagaacaccctaaaagataaa
ttcctgaccattgggcaagcgaaagtttcgacttctgcttatgaagcctatgaactcggc
tatttgcagaaagataaatttgcaattaccatgaatcgtgcccgccttttggcagatgcc
aaagcaaaggcactggaactggctgatgagggttatgttcagcctgctccacgcaatgat
atcaaggttttaggaaaccaaggattagggatcgtgtatgtgggggcttcatcgatgcgt
gaaggtaattatatctctgattatgatcgaaagatctcagaaaaactaggctgggtgatg
tgtggtggaaatttatcgtcaccgaccgaagtgtctgaacaatatctattggatctagag
cgtaaaactttcctcgagctttgtgccgaacgcaaaacgcttgaaaggattcaatttatg
ctgaccaagggtaagcctttacggaactaa
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