Sphingobacterium sp. R2: VXM68_03410
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Entry
VXM68_03410 CDS
T10631
Name
(GenBank) helicase HerA-like domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_03410
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
VXM68_03410
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
TrwB_AAD_bind
ResIII
FtsK_SpoIIIE
AAA_22
AAA
AAA_10
AAA_16
AAA_19
T2SSE
AAA_6
AAA_7
Rv1486c_N
Motif
Other DBs
NCBI-ProteinID:
XCY06009
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Position
complement(829940..831481)
Genome browser
AA seq
513 aa
AA seq
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MANKEQFIEQVKVSYNPKGAFIYLGAGILNGEIQSEAKVNLALKMMNRHGLIAGATGTGK
TRTLQLIAEQLSDAAVPVFMLDVKGDLSGLAEPGLTNQALIDRGSAVGIPFEPSSFPVEL
YSLSGNKGIPMRMTVEDFGPVLLGRILELNETQTGVLAAMFKYAQDQQMPLIDFSDTKKL
LTYLSEGPGSEEIKNDYGKISSASSGTILRKIVALEQQGLAHIFGEREFDINDLFQKVDG
KGVISLLNISDVQDQPILYSTFLLSLLAQLFKNMPEVGDLDKPKLVFFFDEAHLLFNGAP
KAFLTQVDQIIRLIRSKGIGVFFCTQSPTDVPESVLAQLGNRVQHALRAFTPNDAENLKK
IVKTYPKSDFYEIDQVLTSLGTGQALITVLNDKGIPTEVVATHLVPARAVMGPASGATIQ
QMINQSDLKVKYQERQENRSAAEIIEERIQAAAQEEQRAAQEKKAEKASRPTSRRQTPLE
AAQRTATTTLAREGVKFLGKLAAGLLNAFLKKK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataaagaacaatttattgagcaagtaaaggtatcctataaccccaaaggagca
ttcatttatctgggtgcagggattctgaatggggaaattcaatctgaagcaaaagtgaat
ttggcgttgaaaatgatgaaccgtcacggacttattgctggcgctacaggcacaggtaaa
acgcgtacgttacagttaatcgccgagcaattgtcggatgccgctgtacctgtatttatg
ctggatgtcaaaggcgacttatcaggtttagcagagccaggactgactaatcaggcactt
attgaccgcggaagtgctgtgggcataccatttgagccatcatcgtttcccgttgaattg
tactcactttctggcaacaaaggaattcctatgcggatgactgtagaggactttggaccg
gtattgctgggccggatactggagctcaatgaaacgcaaacgggcgtattagcggctatg
tttaaatatgcgcaggatcaacaaatgcctttgatcgatttttcagacacgaagaaattg
cttacctacctctcggaaggaccgggtagcgaagagataaaaaatgattacggtaagatt
agctccgccagctcgggaaccatcttacgtaagatcgttgcattggaacagcaaggtcta
gcgcatatttttggtgagagagaatttgacatcaacgatttgtttcaaaaggtagatggt
aagggcgtgattagcttattaaatatctccgatgtacaagaccaacccatactttattct
acatttttgttaagcttactggcacagctgtttaaaaatatgcctgaggttggcgatttg
gacaaacctaaacttgtctttttctttgacgaagcccatctactgtttaacggagctcct
aaagcctttctcacacaggttgatcagatcattcgtcttattcgatcgaaagggatcggg
gtgttcttctgtacacagtccccaaccgatgtgccagaatctgtattggcgcagttggga
aatcgcgtacaacatgccctgcgtgcttttacacccaacgatgctgaaaacttaaagaag
attgttaaaacatatcccaaatccgacttttatgaaattgatcaagtcttaacctcctta
gggacagggcaggcattgattaccgtattgaatgataaaggtatccccacagaggttgtt
gctacgcatttggtacctgcccgtgccgtgatggggcctgcaagtggcgcaacaatccaa
caaatgatcaatcagtctgatttaaaagttaaataccaagagcggcaagaaaatcgctct
gcggctgaaatcatagaagaacgaatccaggcggcagcacaggaagaacaacgcgcggcc
caggaaaaaaaagcggaaaaagcgagtcggcccacttctcgaagacagactcctttggaa
gccgcacaacgaactgctacaacgactttagcgcgcgaaggggtgaagtttttgggcaaa
ttagcggcgggattattaaacgcattcttaaaaaagaaataa
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