Sphingobacterium sp. R2: VXM68_04315
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Entry
VXM68_04315 CDS
T10631
Name
(GenBank) glycoside hydrolase family 88 protein
KO
K15532
unsaturated rhamnogalacturonyl hydrolase [EC:
3.2.1.172
]
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
VXM68_04315
Enzymes [BR:
sprz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.172 unsaturated rhamnogalacturonyl hydrolase
VXM68_04315
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_88
Beta-AFase-like_GH127_cat
GlcNAc_2-epim
C5-epim_C
Glyco_hydro_76
DUF1344
HDNR
Motif
Other DBs
NCBI-ProteinID:
XCY06183
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Position
1048616..1049962
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AA seq
448 aa
AA seq
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MRKLFLFFLVLPILIPFAGFGQQKPLSEQMANTVLEKLYPDSLFNKTDKFPKWSYDMGVI
FEGLTAVWRNTGNADYFNYMQSRMDAYLSIPDSIKNYDVEDFNIDNIKNGTTLLMLYKVT
GKEKYLQACHRLYAQLQKHPRTHEGGFWHKKIYPYQMWLDGLYMAQPFYAEYASLMNIPS
AFDDIANQFVYMEKNARDPKTGLLYHGWDESKKERWSDPKTGLSPHFWARGMGWYVMALV
DVLDYFPEDHPRRQELIAILDRTLSAVVKYQDTKTGVWYDIVDLGTRKGNYLESSASSMF
VFGLAKSLRKGYIRTSFQKYLDRGYQGIVKEFISVAGDNRVDLNKTVQVSGLGGKKYRDG
SFAYYMSEPVVTNDPKGIGAFILAASEVELAREKKAENNMSSHWIIISTMSIKRRHQVSL
NPITTFGMEMTTTVFPYWAGYLKKMEGS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagttatttttattttttttagtcctgccgatacttattccattcgcaggattt
ggacaacagaaacctctttctgaacaaatggccaacacagtacttgaaaaactttatcca
gattctttatttaataagacggacaagtttccaaaatggtcgtacgatatgggggttatt
tttgaaggcttaacagcggtatggcgcaatacaggaaatgcagattattttaactatatg
caatcccgcatggatgcttacctgagtatacctgattctattaaaaattatgatgtcgaa
gacttcaatattgacaacatcaaaaacggcacaaccctattaatgctatataaagtaaca
ggcaaagaaaaatatcttcaggcatgccatcggttatatgcacaacttcaaaaacatcca
cgtactcatgagggcggtttttggcataagaagatttatccttatcagatgtggttagat
ggcctttacatggcccagcccttctatgctgaatacgctagccttatgaatattccatcc
gcttttgatgatatcgcaaaccaatttgtctacatggaaaaaaatgcccgtgatccaaaa
actgggcttttgtatcatggttgggacgaatcaaagaaggaacgctggtccgatccaaaa
acaggtctatcaccacatttttgggcccgcggtatgggctggtatgttatggctctggta
gacgtattggattattttccggaagatcacccgcgcagacaggaactgatcgcaatctta
gatcgaaccctatcagccgttgttaaataccaggacaccaaaactggtgtttggtacgat
attgtggatttgggaacgagaaagggaaattatttagagtcttcagcttccagtatgttc
gtatttggattagcgaaatcattacgtaaggggtatattcgaacatcgtttcagaagtat
ttggatcggggctatcaagggatcgtaaaggaatttattagcgttgctggagataaccgt
gtagacctcaacaaaacggtgcaggtttctggtttaggaggaaaaaaatatcgcgacggt
agttttgcatattacatgagtgaacccgttgttactaacgatccaaaaggtattggtgcc
tttatccttgccgcatcagaagttgaattggcgcgggaaaaaaaggcagaaaacaacatg
tcgtcacactggataattatttcaacaatgagtataaaaagacggcatcaggtgagctta
aaccctatcactacctttgggatggagatgacaacaacggtttttccttattgggcagga
tatttgaaaaaaatggagggaagttaa
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