Sphingobacterium sp. R2: VXM68_04730
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Entry
VXM68_04730 CDS
T10631
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_04730
Transporters [BR:
sprz02000
]
Other transporters
Pores ion channels [TC:
1
]
VXM68_04730
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
Surfac_D-trimer
HB_LcnD
Motif
Other DBs
NCBI-ProteinID:
XCY07482
LinkDB
All DBs
Position
1149500..1150888
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AA seq
462 aa
AA seq
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MNYSTIKKTAVAATLVAALGFAGTAQAQQVFGGRSQYRTWSIGVQGGITTPNTILPGSNA
FGQKVGYFQNKVGEYYGLTIRKQFSHTFGLELEANRGKIKTYNHNQSGPIAENSLGAKSV
QTDVNWAASLNGVFQLGTIDFLRRENAVNFYAKVGLGVLANNPIQFANNDFTGTEVYNVA
NNPDGQKWGSSIFGDRERKGDRDNKLTAFVPVGVGAKFKLSEVVALNLGYTMNFTDDNLL
YGPARTDYKGKFSTVMAGLEFTLGSRDKQNLTFANPVATMYDELKDPSLRNEVEALKQRV
STLEGTVNTLSADADGDGVSDKFDKCPGTPAGTPVDGSGCPIKFPEPVVSSTTSNGYYAP
IQFEFDSSVLKTSSYSTLDKLAKELRDNNASVQLDGYASAEGSEAYNMTLSKDRANSVKQ
YLVNAGVSSSSITANGYGEKNPVASNATEEGRVQNRRVEIKK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaactattctacaattaaaaaaacagctgttgctgctacattagttgccgctttaggt
tttgctggtacagcacaagctcaacaagtattcggtggtagatcacaatacagaacttgg
tctatcggtgtgcaaggtggtattactacaccaaacacaattcttcctggatcaaatgct
tttggacaaaaagtaggttacttccaaaacaaagttggtgaatactacggattaactatt
cgtaaacaattctctcacactttcggtttagaattagaagcaaaccgtggtaagatcaaa
acttacaatcacaatcaatctggacctattgcagaaaattctttgggtgcaaaatcggta
caaactgacgtaaactgggctgctagcttgaacggtgtattccaattaggtactatcgat
ttcttgagaagagaaaatgcagttaacttctatgctaaagtaggtttaggagtattagca
aataatcctattcaatttgctaataatgacttcacaggtacagaagtatataatgtagcg
aacaatcctgatggtcagaaatggggatcaagtatttttggagatcgcgaacgcaaaggc
gaccgcgacaacaaattaacagctttcgttccagtaggtgttggtgctaaatttaaatta
tctgaagtagttgcgttgaacttaggttacacgatgaacttcactgatgataacttattg
tatggtccagctcgtacagactacaaaggtaaattctctacagtaatggctggtttagaa
ttcactctaggttcaagagacaaacaaaacttgacttttgctaacccagttgctacaatg
tacgatgagttgaaagatccttcattgagaaacgaagttgaagcattaaaacaacgtgta
agcactttagaaggtacagttaacacattaagcgctgatgctgatggtgacggtgtatct
gataaatttgataaatgccctggaactccagctggtactccagtagatggttcaggatgt
ccaatcaaattcccagagccagttgttagctctactacttctaacggttactatgctcca
attcaattcgaatttgatagctcagtattgaaaacttcatcttactctacattagacaaa
ttggctaaagagttacgtgataacaatgcatctgtacaattagatggttatgcatctgct
gaaggttctgaagcttataacatgactttatctaaagaccgtgctaactctgtaaaacaa
tacttagtaaatgctggtgtttcttcatcaagcatcactgctaacggttacggagagaaa
aatccagttgcatctaatgctactgaagaaggtcgcgttcaaaaccgtcgcgttgagatc
aaaaaataa
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