Sphingobacterium sp. R2: VXM68_04880
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Entry
VXM68_04880 CDS
T10631
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sprz03032
]
VXM68_04880
03036 Chromosome and associated proteins [BR:
sprz03036
]
VXM68_04880
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_04880
DNA replication proteins [BR:
sprz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
VXM68_04880
Chromosome and associated proteins [BR:
sprz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
VXM68_04880
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
VXM68_04880
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
XCY06286
LinkDB
All DBs
Position
complement(1183066..1183350)
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AA seq
94 aa
AA seq
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MTKAEIIAEISTKTGLEKVDVQETVEAFFKVVKNAMIGGENVYVRGFGSFVVKKRAEKTA
RNISKNTAIIIPEHFVPSFKPAKIFVEKVKNGNK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgactaaagcagaaattattgcagagatctctaccaaaactggcttagagaaggtagat
gttcaagaaaccgtagaggcgttctttaaagttgtcaaaaacgcaatgatcggaggagaa
aatgtatatgtaagaggttttgggagcttcgtagtcaaaaaaagagctgagaagactgca
agaaacatttcaaaaaatacagcaatcattatccctgaacactttgttcctagtttcaag
ccagctaaaattttcgtagagaaagtaaagaatggcaataaataa
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