Sphingobacterium sp. R2: VXM68_05115
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Entry
VXM68_05115 CDS
T10631
Name
(GenBank) PDZ domain-containing protein
KO
K08676
tricorn protease [EC:3.4.21.-]
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sprz01002
]
VXM68_05115
Peptidases and inhibitors [BR:
sprz01002
]
Serine peptidases
Family S41: C-terminal processing peptidase family
VXM68_05115
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Tricorn_C1
PDZ_Tricorn
Peptidase_S41
PD40
DPPIV_N
PDZ_6
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XCY06329
LinkDB
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Position
complement(1228781..1231045)
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AA seq
754 aa
AA seq
DB search
MSVFQIGLQTVNGYLIFQNKNGSYQLVLTDQFGKDKPLYFNLGETNFYFEPTWSPDSKKL
FYNDSHLNLYYIDIASKAVVKVADDKLSGQTGRVSNHFQPSWSPDSKWISFIRTLENGVP
AVFMYNLDTKKTQQITDGMSSARNTAFSQDGKYLFFTASTNTGLTNSGLHMSAVQRNVDY
AVYAFILSSKTPSFFKNDSDDEQIREENADKKEEGETNKKERLKENDKKSPKKDKKEVAV
ASKPIDKSIQVDFDRIENRIVALPLPAGPYWNLNGLVPNQLTYQRGGTIGAYDFKELENK
TLVENARSYVISADGKKMLYQTGNGFNIVNAGQKVASPTAGEIKLAGIQQLVDPAAEWKQ
VFNEVWSMQKDYFYVENMHGADWKAMKAKYEKFLPFVNHRSDLGYLLNEMMGEMVVGHNY
IYPGDQPSTPSVSVGVLGADYTLKNGYYQIAKLFTRLEWNPSFKAPLAEPGLNIKEGDYI
VAVNGIELTEDRDIYSLFDNTVGKQVMLKINSKPSLVGAREIIVKPISFGDEMNLRSMEW
VERNRKRVNELSNGQIAYVYMPNTGPEGYTYFNRYYFAQMDKKALLMDERNNGGGWVADY
VIDLLSRELIAGWGIRDGKGFTTPGNGIYGPKAMIINENAGSGGDMMPYMFRFKGLGKLV
GRTTMGILVGISGYPPLLDGGRITSPNFGVYDLKGNWIIENEGVAPDVFIEQLPKDLLEG
RDPQLERTVKILLEEMKTYPYKNLQKPADPIRVN
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttccagattggtctccaaacggtaaatgggtatcttatatttcagaacaaa
aatgggtcctatcagttggtgctgacagatcagttcggaaaagataaaccattatatttt
aatttgggtgaaactaatttctattttgagccgacttggtcgcccgattcaaaaaaatta
ttttacaatgattcgcatcttaatctgtattatattgacatcgcttctaaagcagttgtc
aaagttgctgatgataaattaagtgggcaaacagggcgggtatctaatcatttccagcca
agctggtctccagattctaaatggatatcctttattcgtacgctggaaaatggagtacct
gctgtattcatgtacaatttggatacaaagaaaacccaacagatcaccgatggcatgagc
tctgctcgtaatacggcattctctcaagacggtaaatatttattttttacagcaagtaca
aatacgggtttaacgaattctggtttacatatgtccgctgtacagcgtaacgtagattat
gcagtctatgcttttatcctgtcgagcaaaacaccatcattctttaaaaacgatagtgat
gatgagcaaatccgtgaagaaaacgcagataaaaaggaagaaggagaaactaataaaaag
gagcgcttaaaagaaaacgataagaaatctcctaaaaaagataaaaaggaagtcgcagtg
gcaagcaagccaatcgacaaatctattcaggtcgatttcgatcgtatagaaaatcgaatt
gtcgcgctgcctttaccggcaggtccttattggaacctaaatggtttagtacctaatcaa
ttgacctatcaacgcggtggaacgattggtgcctatgattttaaggaactcgaaaataaa
accttagtggaaaatgcacgtagttatgttattagtgctgatggtaagaaaatgttgtac
caaacgggaaatggttttaatatcgtaaatgctgggcaaaaagttgcttcacctactgct
ggagaaatcaaattagctggaatccagcaactggtggatcccgcagcggaatggaagcag
gtgttcaatgaagtttggtcaatgcaaaaggattatttttacgtggaaaatatgcatggt
gccgactggaaagcaatgaaagctaaatatgaaaaattcctaccttttgtcaaccatcgt
tctgatcttggttatttattgaatgaaatgatgggagaaatggtcgtaggacataattat
atttatccaggagatcagccttctacaccttcagtttctgttggtgtgcttggagcagat
tatacgctaaagaatggttactatcagatcgctaaattatttacgcgcctagaatggaat
ccttctttcaaagcaccattggctgaacctggattgaacatcaaggaaggagattatatt
gttgctgtgaatggtatagaattgactgaagatagagatatctatagcttatttgacaat
actgtgggcaagcaagtgatgctcaagatcaattcaaaaccttcgttggttggcgcacgt
gaaatcattgttaaaccgatttcttttggcgatgaaatgaacttgcgtagcatggaatgg
gtagagcgaaaccgtaaaagagtgaatgaattgagtaatggccaaatagcttacgtgtac
atgccgaacaccggtcctgaggggtatacttatttcaatcgttattacttcgctcagatg
gataaaaaggctcttctgatggacgaacggaacaacggtggcggatgggttgctgattat
gtgatcgacctcttgtctcgcgagttaattgccggctggggcattcgtgatggaaaggga
ttcacgacacccggtaacggtatttatggaccgaaagccatgatcatcaatgaaaatgcc
ggttcgggcggtgatatgatgccttatatgttccgttttaagggattaggcaaattggtt
gggcgtaccacaatgggaatcttagtgggtatcagcggttatcctccattgctggatgga
ggccggataacatctccaaattttggtgtatatgatttgaaaggaaattggatcattgaa
aatgaaggagttgccccagatgtgtttatcgaacaattaccaaaggatcttttagaaggt
cgtgatcctcaacttgaaagaacggtaaagatcttgttggaagaaatgaaaacttatccg
tacaaaaatttgcaaaaaccagccgatcctatccgggtgaattaa
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