Sphingobacterium sp. R2: VXM68_05395
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Entry
VXM68_05395 CDS
T10631
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VXM68_05395 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_05395 (recO)
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VXM68_05395 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
VXM68_05395 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
XCY06384
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All DBs
Position
complement(1287042..1287764)
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AA seq
240 aa
AA seq
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MLNKTRAVVLKTTNYSESSLVAQLYTEHFGMQSYLIAGARKPKAKIKANILQPLHLLEIV
ATHKDNGSLQRISEARQVPALQEIPYDIVKSSLALFLNEILYKILKEQEHDSYLFEFIHQ
SILWLDQSHSNLANFHLVFLIKLTRFLGFYPAKSKQVLPYFNLYEATFSNSLPEHPFVLQ
EPHTSIFRTLIDSEYSNCERIKMTSSDRQFLLEKVLDFYRLHRTNFKEIKSLYILEEIFR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaaactagagctgtagtcttaaaaacaacaaactattcggaaagtagtctc
gttgcccagctatataccgaacattttggcatgcaatcttatcttattgccggagcaagg
aagcctaaagcaaaaatcaaggccaatattctccaacctttacatttattggaaatagtc
gccacacataaagataatggttcactccaacggatctctgaagcacgtcaagtacccgca
ctgcaagaaataccttatgatatcgtcaaaagttcgctggctctttttctgaatgaaata
ctttataaaatactgaaggaacaagaacatgacagctaccttttcgaatttattcatcaa
tccatactttggctggatcaaagtcattcaaacctcgccaattttcatctcgtcttttta
ataaaactcacacgcttcctagggttttatccggccaaatcgaaacaagtactcccctat
ttcaatctttacgaagcaaccttttcaaatagtctccccgaacacccgtttgttttacag
gaaccacatacgtcaatttttagaaccttaattgattccgaatattcaaattgcgagcga
attaaaatgaccagctcagatagacaatttttgttggaaaaagtacttgatttctatcgc
ttgcaccgtacaaattttaaagaaataaaatcgctctacattctcgaagagatttttcgg
taa
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