Sphingobacterium sp. R2: VXM68_05485
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Entry
VXM68_05485 CDS
T10631
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00230
Purine metabolism
sprz01100
Metabolic pathways
sprz01110
Biosynthesis of secondary metabolites
Module
sprz_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
VXM68_05485 (purD)
Enzymes [BR:
sprz01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
VXM68_05485 (purD)
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GFIT
Motif
Pfam:
GARS_A
GARS_N
GARS_C
CPSase_L_D2
ATP-grasp_3
ATP-grasp_4
Dala_Dala_lig_C
Motif
Other DBs
NCBI-ProteinID:
XCY06402
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Position
1310592..1311866
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AA seq
424 aa
AA seq
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MNILIIGSGGRESAFAYKLSKSPRLDQLFIAPGNAGTGAYGQNVNIKVTDFAALATFVLE
NNVHMVLVGPEEPLVKGIHDYFLNREDLKHIPVIGPQQEGAQLEGSKDFSKQFMDRHGVP
TAASRSFDATSLDEGLAYLETQKLPIVLKADGLAAGKGVLICETLEDAQAELKAMIADSK
FGEASRVVVVEEFLKGIELSVFVLTDGNSYKVLPSAKDYKRIGEGDTGLNTGGMGSISPV
PFADETFLNKVEERIIRPTVEGLKKDGIPYKGFIFIGLMNVEGEPYVIEYNVRMGDPETE
SVLPRIESDLLDLLEGVAQGNLDQRSYTVSPQTAVTVMLVAGGYPGDYESGKEITNIENV
KESIVFQAGTKEVEGKIVTAGGRVIAVTTLQDTLFEALQQATADAGRIYFEGKYFRRDIG
FDLI
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcctaataatcggttcaggaggtcgtgaatcggcctttgcctataaattgtcg
aaaagtccacgtttagatcaattgtttattgctccaggcaatgcaggaacgggggcgtat
ggtcagaatgtaaatattaaggttactgactttgcagctcttgctaccttcgttctggaa
aataatgtgcacatggtgctggtaggtccggaggagcccttggttaaaggtattcatgat
tacttcttaaaccgggaagacttaaagcatatccccgttataggaccgcaacaggagggt
gctcagctggaaggctcaaaagatttttcaaagcagtttatggatcgccatggtgtacct
acagcagcttcgaggtcctttgatgcgacatccttggacgaagggctggcgtatcttgaa
acgcaaaaattacctattgtgctgaaggcggatggtctggctgcgggtaaaggggtactg
atttgcgagaccctagaggatgctcaagctgagttaaaggcgatgattgcagattctaaa
tttggggaagcgagccgggttgtggttgttgaagaatttttaaaaggaattgaattgtca
gtttttgttttgacagatggcaattcgtataaagtgcttccttctgcaaaagattataaa
cgtattggggaaggcgatacaggtctaaacactggaggcatggggtcgatatctcctgtt
cctttcgcggatgagacttttttgaataaagttgaagagcgcattatcagaccaacagta
gagggacttaaaaaggatggtattccgtataaaggatttatttttatcggtttgatgaat
gtggaaggggaaccttatgtcatcgagtataatgttcgtatgggggatccggaaactgaa
tccgtattgccacgaattgaatcggatctgttggatttattggaaggtgttgctcaaggc
aatttggatcaacgctcttataccgtatcgcctcaaacagccgtgacagtgatgttggtt
gccggaggttaccccggagattatgaatctggaaaagagatcaccaatattgaaaatgtc
aaagaatccatcgtatttcaagcaggtacgaaggaagtagagggcaagatcgttacagca
ggtggacgtgtcattgccgtgaccacattacaggatactttgtttgaagcccttcaacag
gctactgcagatgcgggaagaatttattttgaaggaaaatacttccgaagagatatcggt
tttgatcttatttaa
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