Sphingobacterium sp. R2: VXM68_05520
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Entry
VXM68_05520 CDS
T10631
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_05520
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_05520
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Antiholin
Motif
Other DBs
NCBI-ProteinID:
XCY06408
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All DBs
Position
1319022..1321079
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AA seq
685 aa
AA seq
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MQRNKICMAMLLVLGASFVSSCKKDYLKSDQYFKDRLNIEKTFKSKVYSEEWLAHVFEEF
KGENADVASKGMTPHCFADDMYYGDRDRDYDPSKNELSYNMFKMGQYTESDKQGTWTQSY
RGIRNASTFIQNIYMNSEMSATEISDYRGQARFARAYLYWLLLRKYGPIPLLPDEGLDYT
DSYDDLAIPRSTYEECATYISDELLQAAREMESLGMKRGQDGSARPTVGAALAARAKVLL
YAASPLANGNNSGYAALLVDKQGKRLLSAEFKEEKWAKAAAAARDVIELGVYKLYTAPFQ
ETGDDATVKPPEDPNFSAKSWPEGWANIDPMKSYAQVFDGTLSASGNPELIFTRGSNQPN
EGIDQMVIHQLPRSATGWNTHGLTQKLVDAYYMNDGTDVPGKDKEIGRGNGSNRSTGYVT
QDDYNAKKYRPLRAGASLQYANREPRFYASVAYSGSFWTLLNETKEENRNKQVFYYSADP
KGNGFNSANGYWLRTGFGVKKFVHPSDTYEGGVGSRVVPKAEPAIRYADILLMYAEALNE
LSGSFTISSWRGGSYTISRDIAEMKKGIQPVRIRGGVPDYAESVYSSKNELRRTIKRERF
IELMGEGQRYYDLRRWMDAPVEEALPVYGCNVLMNEKERDLFYQPVAIWTLKTTFADKMW
FWPISHTELKRNKNLTQNPGWTYND
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagaaataaaatatgcatggccatgttgcttgtgctaggagcaagttttgtctca
tcctgcaaaaaggattatttgaaatcggatcaatattttaaggatcgacttaatatagag
aagacctttaaaagtaaggtatattcggaagaatggttagcgcatgtatttgaggagttt
aaaggcgagaatgctgatgttgccagtaaaggcatgacgccgcattgttttgcggacgac
atgtattacggtgatcgagatagagattatgatccctcaaaaaatgagctctcttacaat
atgttcaaaatggggcaatatactgaaagtgacaaacagggcacatggacgcaatcctac
cggggcattcgtaatgcgtcgaccttcattcagaacatatacatgaacagtgagatgtcg
gcaactgaaatttcggattatcgtggccaagcacgatttgcacgggcatacctttattgg
ctgctgctccgtaaatatggccccattccgctgttgccggatgaaggactggattatacc
gatagctatgatgatctggcgattccgcgaagcacctatgaggagtgtgcaacctatatc
agtgatgaattgctacaggcagctagagaaatggagtctttagggatgaagcgcggacaa
gacggctctgctcggccaactgttggggcggctttggctgctcgtgccaaagtgttactc
tacgccgcaagtccattggccaatggtaataactccggctatgcggcattattggtcgat
aaacagggcaaacgcttgctttccgcagaatttaaggaagagaaatgggcgaaagcagca
gctgccgcacgagacgtaatcgagctcggcgtgtataagctttatacagcaccttttcag
gagactggtgacgatgccaccgtcaaacctcctgaagatcccaatttttcagctaaaagc
tggcccgaagggtgggcaaatattgaccccatgaaatcatatgcacaggttttcgacggt
acgttgtctgcctcaggcaatcctgaactgatatttacccgtggtagcaaccagcccaac
gaagggattgaccaaatggttattcatcaattgccgcgctcggcgacaggatggaatacc
catggactgacacagaaactcgttgatgcgtattatatgaatgatggtacagatgtaccg
ggtaaggataaggaaataggtcgaggcaatggttcaaacagaagtacgggatatgttact
caggacgattataatgcaaaaaaataccgaccactgcgtgcaggtgcttctctgcaatat
gcgaatcgtgaaccgaggttttacgcttcagtagcttacagcggaagtttttggacgctg
ctgaacgagacaaaagaggaaaaccgtaacaagcaagtgttttattatagtgcagatccc
aaaggcaatggctttaactccgccaatggatattggttgcgtacaggttttggggttaaa
aagtttgttcacccgagcgatacttacgaaggtggtgttggatcacgtgtggttcccaag
gcagaacctgcaatccgttacgcggacatattattaatgtatgccgaagcattgaatgaa
ttaagcggttcttttacaatttcatcctggcgcgggggaagttatacaataagtcgtgat
atcgctgaaatgaaaaaaggtattcagcctgtacggatccgcggtggagttcccgattac
gctgaaagtgtatacagcagtaaaaatgaactgcgtcgtaccatcaagcgtgaacgtttc
atcgagctgatgggcgagggacaacgttattatgatttacgtcgctggatggatgctcca
gtggaagaagccttaccggtttatggctgtaatgtcttgatgaatgaaaaagaacgtgat
ctcttttaccaaccggttgcgatttggacactgaaaacgaccttcgcagacaaaatgtgg
ttttggccaatcagccatacagaacttaaacgcaacaagaatttaacacaaaatcctggt
tggacttataatgattaa
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