Sphingobacterium sp. R2: VXM68_05535
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Entry
VXM68_05535 CDS
T10631
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VXM68_05535 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_05535 (xseB)
Enzymes [BR:
sprz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
VXM68_05535 (xseB)
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VXM68_05535 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
PUMA_CC
Seryl_tRNA_N
Laminin_I
vRNAP_dom_2
NPV_P10
MG280
Spidroin_MaSp
DUF1951
RecG_N
FIVAR
Motif
Other DBs
NCBI-ProteinID:
XCY06411
LinkDB
All DBs
Position
complement(1322982..1323203)
Genome browser
AA seq
73 aa
AA seq
DB search
MEQNYTYTDAFNELQTIVGEIENGTTNIDELAEKIKRASDLIQVCKAKLTATEDEVNSLL
QKISAAEETNDEE
NT seq
222 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaattatacctatacagatgcctttaacgagttacaaactatcgtgggggaa
atagaaaatggcacaacaaacattgatgaactggccgaaaagattaaaagagcctcagac
cttattcaggtctgtaaagcaaaattaacggcgacagaggacgaagtgaatagtttatta
cagaaaatatcagcagcagaagagaccaatgatgaagagtag
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