Sphingobacterium sp. R2: VXM68_05555
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Entry
VXM68_05555 CDS
T10631
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_05555 (radA)
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VXM68_05555 (radA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA
Lon_C
DUF7125
AAA_22
AAA_24
AAA_16
AAA_14
AAA_5
nSTAND3
nSTAND_NTPase5
ABC_tran
CobU
SLFN-g3_helicase
NTPase_1
NACHT
RNA_helicase
DZR
Elong_Iki1
Rad51
AAA_18
Hrs_helical
zf-C2H2_7th_ZNF462
DAP3
A2L_zn_ribbon
NPHP3_N
RUBY_RBDX
zf-RING_10
DUF7129
divDNAB
Motif
Other DBs
NCBI-ProteinID:
XCY06415
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All DBs
Position
1327784..1329169
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AA seq
461 aa
AA seq
DB search
MAKSKSAYFCQNCGYESPKWMGQCPSCKQWNSFVEEVVEKGSSKVPEWRSSTTGGNTKRA
NKAAIIHEIVYQDESRISTPDQEFNRVLGGGIVPGSLVLIGGEPGIGKSTLMLQLALSIP
QVKTLYISGEESEQQIKMRAERLSQSSKANCYILTETSTQNIFKQIETVQPNVIVIDSIQ
TLHSAQIESAPGSVSQVRECTAELLRFAKETSTPVFIVGHITKDGSIAGPKVLEHMVDTV
LQFEGDRHHVYRILRAVKNRFGSASELGIYEMQGSGLREVSNPSEIMISQRDEPVSGVSI
ASMLEGMRPMMIEVQALVSNSAFGTAQRSSTGYDTKRLNMLLAVLEKRFGFRLSAQDVFL
NIAGGLRVEDPAIDLAVVVAIISSQQDIPIRSNLTFAGEVGLSGEIRAVNRIEQRIQEAE
KLGFDGIFISKFNTKGLDAKKYNIAIRPVAKLEDIFSALFG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcaaaatcagcatacttctgtcaaaactgtggctatgaatctcccaaatgg
atgggacaatgtccttcctgtaagcaatggaatagctttgttgaagaagtggtcgaaaaa
gggagttcaaaagtccccgaatggcgtagttctacaactggtggcaatacgaaaagggcc
aataaagcagctattattcacgaaattgtttaccaagatgagtctcgaatatccacgcct
gatcaggagtttaaccgggttcttggcggaggcattgttccggggtcactggtgcttatc
ggtggagaacctgggattggaaagtcaacgttaatgttacagttggctttatctattcca
caagtcaagacactttatatttctggggaggaaagtgagcagcagatcaagatgcgggcc
gagcgattatcacaatcatccaaagcgaattgctatatcctgacggaaacatccacgcaa
aatatttttaagcagatcgagacggtacagcccaatgtcattgttattgactcgatacag
acattacattccgcacagattgaatccgctccgggttcggtttctcaggttcgcgaatgt
accgcagaattgttgcggtttgccaaggagacgagcactcccgtctttattgtgggccat
atcaccaaagatggatcgattgctggtcccaaggttttagagcatatggtggataccgtt
ctccaatttgaaggcgatcgtcaccatgtctatcgaattttgcgcgccgtaaaaaatcgc
tttggatctgcttcagaactgggaatttatgaaatgcaggggtcggggttgcgggaagtg
tccaatccttcggagattatgatttcgcaacgcgacgaaccggttagtggagtttccatt
gcatccatgctcgaagggatgcggccgatgatgatcgaggttcaggcactggtcagtaac
tccgcatttggtacagcacaacgctcttccacagggtacgacacgaaacggttaaatatg
ctgctggctgttttggagaaacgctttggctttaggctgagcgcacaggatgtattcctg
aatatcgccggtggactgcgtgttgaagatcctgcaatcgatctagccgtagtcgtagcg
attatttcttcacagcaagatatacctattcgctccaatctgacttttgcaggtgaggtt
ggcttatcgggcgagatcagggctgtaaatcgaattgaacaaagaatacaagaggctgaa
aagttgggttttgatggtatatttatttctaaattcaataccaaaggcctcgatgcgaaa
aaatataatattgctattcggcctgtcgccaagttagaggatatattcagtgccttgttt
ggttag
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