KEGG   Sphingobacterium sp. R2: VXM68_05985
Entry
VXM68_05985       CDS       T10631                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sprz  Sphingobacterium sp. R2
Pathway
sprz03030  DNA replication
sprz03430  Mismatch repair
sprz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sprz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VXM68_05985
   03430 Mismatch repair
    VXM68_05985
   03440 Homologous recombination
    VXM68_05985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sprz03032]
    VXM68_05985
   03400 DNA repair and recombination proteins [BR:sprz03400]
    VXM68_05985
Enzymes [BR:sprz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VXM68_05985
DNA replication proteins [BR:sprz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VXM68_05985
DNA repair and recombination proteins [BR:sprz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VXM68_05985
SSDB
Motif
Pfam: RNase_T Rv2179c-like DUF5497
Other DBs
NCBI-ProteinID: XCY06499
LinkDB
Position
1434749..1435270
AA seq 173 aa
MQSGLSFTAIDFETATANQNSACAVGLVVVEQGIIVDEFYSLIQPPQNQYMWQTTRVHGI
RPKDTAQAPTFKEIFPRIYPLINNRIMVAHNELFDRGVLRKTMNYYNLPYDQLGLQEKWE
CTFKIYQGKGFKPARLNACCEVLGIELNHHEALSDARACAHLYIRHHEIGMVL
NT seq 522 nt   +upstreamnt  +downstreamnt
atgcaatcaggattaagttttaccgcaatagatttcgaaacagccacagcgaatcagaac
tcggcttgcgccgttgggctggtcgttgttgagcagggaattattgtggatgaattttat
tctttaatacagcctcctcaaaatcaatacatgtggcagactacgcgtgtgcatggtatc
cgacctaaggacaccgcacaagcacctacttttaaagagatctttccacgtatttatccg
cttattaataatcgcattatggtcgcgcataatgagctgtttgatcgcggagtgcttcgc
aaaaccatgaattattacaacttaccttacgaccaacttggtttgcaggaaaaatgggaa
tgtacctttaaaatttaccaaggcaaaggatttaagcccgctcgtttaaacgcctgctgt
gaagtgcttggtattgaactcaaccaccatgaggcactttctgatgcgcgagcttgtgcg
cacttgtatattcggcatcatgagatcggaatggtactataa

DBGET integrated database retrieval system