Sphingobacterium sp. R2: VXM68_06340
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Entry
VXM68_06340 CDS
T10631
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_06340
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_06340
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
TPR_19
TPR_2
TPR_6
TPR_16
VCPO_N
TPR_1
TPR_8
Motif
Other DBs
NCBI-ProteinID:
XCY06569
LinkDB
All DBs
Position
complement(1507654..1509336)
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AA seq
560 aa
AA seq
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MKKYISIATLSVALLLSGCTKLDQEFYSSVTPDTFFKSEKDIKAALFRPFTHAKWYMGED
RWRLQEYTADNFAITTKGRHWYNGGENERYHYHRWTADDNWVWGSWRGTLMGVALALDAK
SDLSKLDYSKFTLTEERKAADLAQLDALIAYFYLRGLDYFGGMPIFESLDQESLPRNSDQ
ELFAHIEKLLKAAIENLPAKKAGDREEGAIRKAAAAAMLAQLYFNAEAYIGKSMYAESQK
LAQDIVNKVYGDYSLDTKWNGVHGFKNNESPEMIWSMPSEFKMLEYNWFYADFYHYNTRQ
FFAQDMGGNNGAHLTPSKKPNGSLYAADFKLGSPFETFDQGDLRKAPYVYHGTDQYEGMF
IVGPHKTPSGEVIVGGEEYKDKPLDFVDQVGRFSEVGPGKKYSSIDQLPSKMSEGEENTG
IRLVKVPIPNLANNTLRWGADMPIIRLSEIYYMLAECEFRLGNKEKAAALFNTVRKRNFA
QEQDPNPVTVANIDKYRILDEWSIEFLGEGRRRTDLIRWKAFTTEKWWDHNPSTSAHLNR
FPVPNQAIAGNNSLTQNPGY
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatatttccatagccaccctatccgtagccttgctgctatccggatgcacc
aaattggatcaagaattttatagttcggtcacaccggacaccttttttaaaagtgaaaaa
gacatcaaagctgccttatttagaccatttacccatgccaaatggtatatgggcgaagac
cgctggcgcttgcaggaatacacagccgacaattttgccatcaccaccaaagggcggcac
tggtataatgggggcgagaatgagcgctaccattaccaccgttggacggcggacgacaac
tgggtctggggcagctggcgcggcacgctgatgggtgttgccttggcgcttgatgcgaaa
agcgacctgagcaaactggactatagcaaatttacacttacggaagaacgtaaagcagca
gacctggcgcaattggatgccttgatcgcctatttctatctgcgcgggctggattatttt
ggcggtatgcctattttcgaatccctagaccaagaatccctaccgcgcaatagcgaccag
gagctctttgcacatatcgagaagctgctcaaagcagctattgagaatctgccagcaaag
aaggccggcgacagagaagagggcgctatccgcaaagctgccgctgcagccatgctggca
cagctctacttcaatgcagaggcctatatcgggaaatccatgtacgctgaaagccaaaag
ctagctcaggatattgtcaataaagtttatggcgactacagcttggataccaaatggaac
ggcgtacatggatttaaaaacaatgagtcgcccgagatgatttggtctatgccgtcagaa
ttcaagatgctggagtacaattggttttatgcagatttctaccattacaacaccaggcag
ttctttgcccaagatatgggcggcaacaatggcgcccacctaactccatccaagaaaccc
aacggctccctttacgcagcagactttaagctaggttcaccttttgaaactttcgaccaa
ggcgatctccgcaaagcaccctatgtctaccacggcacagaccaatacgaaggtatgttt
atcgtaggcccccataagacccctagcggcgaggtcattgttgggggtgaagaatataaa
gataagcccctggactttgtcgaccaagtcggccgcttttcagaagttgggcctggaaaa
aaatacagttccatcgaccagctgccctcaaagatgtccgaaggcgaggaaaacaccggt
atacgtttggtgaaggtacctatcccaaatcttgccaacaataccttgcgttggggtgca
gatatgccgattatcagactgtctgaaatatactatatgcttgccgaatgtgaattcagg
ttaggaaataaggaaaaagctgcagcactattcaataccgtccgaaaacggaattttgca
caagagcaggatccgaatcccgtaactgtagccaatattgacaagtaccgtattttggat
gaatggagtattgaatttttaggcgaaggacgccggcgtaccgatttgatccgatggaaa
gcattcaccacagaaaaatggtgggatcataatccaagtacttcggcccatctgaatcgt
tttcccgtacccaatcaggccattgccggcaacaatagtctgacacaaaatccaggttat
taa
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