Sphingobacterium sp. R2: VXM68_06345
Help
Entry
VXM68_06345 CDS
T10631
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_06345
Transporters [BR:
sprz02000
]
Other transporters
Pores ion channels [TC:
1
]
VXM68_06345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
Plug
CarboxypepD_reg
Big_1
TTR_TEN1-4
CooC_C
MetallophosN
DUF7382
Motif
Other DBs
NCBI-ProteinID:
XCY06570
LinkDB
All DBs
Position
complement(1509353..1512331)
Genome browser
AA seq
992 aa
AA seq
DB search
MNFKMNSFKVATKLLLFSSSLSAGAAYALPHAPYVQEAQTTIKGSVKDEQGNPIVGATVS
VKGSTISTSTDANGAFTLSNVEKNAVLIIRMIGFTAREITYNGSSSVHVQLLSDTQQLEE
AVVVGYGTLDKKELTSAVSSIKQKDMVAGAVSPLLAIQGKVPGLSVLSNNGTDPNAGISL
QLRGVNSVNASQGPLVVIDGVPGGDINSVAKEDIETINVLRDASAAAIYGTRASGGVILI
TTKRPQVGKAQVNFTSEYFVETIRKRPQVLSAEKFVEYGLGEDLGHRTDWYDEVTNNNPF
SHRQVANISGGSENANVYTTFTKRDAKGMAITSKREEIGGRINSAFKFFDGFAELSTNVS
YNQVQAFGSNRDIFNNNDIFNMALVLNPTQTPYDANDVSGYNVLEGGYDTWNPVAEARLR
SDEKQFKYLLANATLKLNLTEHLTTSATIGVKNNSEHGNYYRSAQHRISRENNVDGFAKQ
YYSRFNDRIFEWTANYTNRWDEHSLNAVAGYSYQDFNGQGFSAENSNFPVDGIADNDMGT
GTYLPDGRAGLGSWKNPWVKLAAFFGRVNYSYLDRYILTATARYEGSSKFAPKNRWGFFP
GLSAGWRISQESFLKDVNFINDLKLRAGYGETGNEGFDAKVATRMYSADTWFLQDGKWFR
TYGVMHNQNPDIKWEVKKEYNLGLDFSVLNNRLSGRFDIYKRKIDDLIFDISVSQPPAIH
DRTTMNVGSMQNTGYEFELNFKAVDNDNFSYTTSLVGSHNKSRLNTLWGSQTFTDRKDFP
APGSPGSAVRLYPGEDIGRFFLWKFAGFTDDGYWKLYDKDGNAFDVRDRNKTVGDKSFVG
NAIPTLQLSWNNQFSYKNWDASIYMRSWIGHDVFNMINMYYSLPNVKGQNVLEEAYDKHK
NIKGEKELSDYWLEKGTFLKVDALNIGYRFNQNWIKPLKSMRVYATARDLFVFTNYTGLD
PEVNINGLEPGFEERNVYPKTRTFMMGLQVNF
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgaattttaaaatgaacagttttaaagtggctactaaattattgctattcagcagcagt
ttatctgctggagccgcttacgcattgccccatgccccctatgttcaggaagcccaaact
acaatcaagggcagtgtcaaggatgagcagggcaaccctattgttggtgccactgtctcc
gtcaagggtagcaccatcagtacctccaccgacgccaatggcgcgtttacactcagcaat
gtcgagaaaaatgccgtccttatcatccgcatgatcggctttaccgccagagaaattacc
tataatggcagctccagtgtacatgtacaactgctgtcagacacgcagcagctcgaagag
gctgttgttgtaggctacggtactttggacaaaaaagagttgaccagcgccgtatcgagc
atcaagcagaaagacatggttgcgggggctgtatcaccgctcttggcgattcagggaaaa
gtacccggtctcagtgtactttccaacaacggcacagaccccaatgcgggcatctcactt
caattgcgtggggtcaattcggtcaatgcctcacagggtcccctggtggttattgacggt
gtccccggtggcgacatcaattccgttgcgaaagaagatattgaaaccatcaacgtactt
cgggatgcctccgctgcagccatctacggaacacgtgcttccggtggtgtcatcctgatc
accaccaaaagacctcaggttggcaaggcgcaagtgaattttacctccgaatactttgtc
gaaaccatccgcaaacgtccacaggtattatcggcagagaaatttgtcgaatatggcctc
ggtgaagacctcggacatcgtacagactggtatgatgaagtcaccaataacaatccattc
agccatcggcaggtcgccaacatcagcggcggatccgaaaacgccaatgtctatactacg
tttaccaaacgcgacgccaaagggatggcgatcacgtcaaaacgtgaagaaatcggcgga
cgaatcaacagtgccttcaaatttttcgacggcttcgccgagttgagcaccaatgtaagt
tacaatcaggtacaagctttcggttccaatcgcgatatcttcaacaacaatgacattttt
aatatggccctggtgctcaatcctacccaaacgccttacgatgccaatgatgtcagcgga
tataatgtattggaaggtggatatgacacctggaatcctgtcgctgaggcgcgcctgcgc
agcgatgaaaagcagttcaaatacctgttggccaatgcgaccctaaaattaaacctgaca
gaacacctgaccaccagtgcgaccatcggcgtaaaaaacaacagcgagcatggcaactat
taccggtcggcccaacatcgtatttcgcgtgagaataatgtggatggatttgccaagcaa
tattacagccggttcaatgaccgcatctttgagtggaccgccaattacaccaaccgatgg
gacgaacattccttaaacgctgtagcaggctacagctatcaagatttcaatggacaagga
ttttctgccgaaaactccaatttcccggtggatggtattgccgacaacgacatgggtaca
ggaacctatttaccagacggtcgggcaggtcttggatcctggaaaaacccatgggtcaaa
cttgccgccttctttggccgtgtcaactactcctatctggatcgctatatcctgaccgca
acggcgcggtacgaaggatccagcaaatttgcgcccaaaaacagatggggtttctttccg
gggctttccgcaggctggcgtatttcacaggagtccttcctcaaagatgttaattttatc
aacgacctaaaactccgggcaggctatggcgaaacgggcaatgaaggcttcgatgcaaaa
gtggcaacacggatgtatagtgccgacacctggtttctacaggatggtaaatggttcagg
acatacggtgtgatgcacaaccaaaatccagatatcaaatgggaggtcaaaaaagaatac
aaccttgggttggacttttccgtactgaacaatcgcttaagtggtcgttttgatatctac
aaacgtaaaatcgatgatctgattttcgacatcagcgtatcccagcccccagcaatccac
gatcggacaaccatgaatgtgggtagtatgcaaaatacggggtacgagtttgaattgaac
ttcaaagccgtagacaacgacaatttcagttacacaacaagcctagtgggttcgcataat
aaaagcaggctcaacaccttatggggtagtcagacctttaccgaccggaaggacttcccg
gcccccggctcaccagggtcagcggtgaggttatatcccggcgaggacattggccgcttc
ttcctttggaaatttgcaggatttaccgacgatggttattggaaactatacgataaagac
ggtaatgcatttgacgtgcgcgaccggaataaaacggtaggcgacaagtcatttgtcggc
aatgccattccaacactacagctttcctggaacaaccagttcagctataaaaactgggat
gccagtatctacatgcgcagctggatcggacacgatgtgttcaatatgatcaacatgtac
tatagcctacctaatgtaaaaggtcagaatgttttggaagaagcctacgacaaacataaa
aatatcaagggagaaaaagagctgagcgactactggttagagaaaggcacctttctcaag
gttgacgcactcaacatcggttaccgctttaaccaaaattggatcaagcctttaaagtcc
atgcgggtatatgccaccgcacgcgacctctttgtatttacaaactacacggggctagat
ccagaagtcaatatcaatggtcttgaaccgggatttgaagagcgtaatgtctaccccaag
acacggacttttatgatgggtttacaagtaaatttttaa
DBGET
integrated database retrieval system
