Sphingobacterium sp. R2: VXM68_06390
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Entry
VXM68_06390 CDS
T10631
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sprz Sphingobacterium sp. R2
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sprz02000
]
VXM68_06390
Transporters [BR:
sprz02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
VXM68_06390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_12
TPR_2
TPR_19
TPR_6
TPR_8
TPR_14
ANAPC3
TPR_17
TPR_1
TPR_16
Motif
Other DBs
NCBI-ProteinID:
XCY06579
LinkDB
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Position
complement(1523426..1524850)
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AA seq
474 aa
AA seq
DB search
MTLKTIMAACATLVVFSACDKYLDITPKGSQLVRTTQDYYDLVAYPNRGYPVNNFQYLVD
DQYLKESNVIGLTPNINTINFLFQEKEDRVSQLNSSSFYNQCYKYIAQWNMIISLVDESP
GDSQLKTLAKAEAKMFRAFDYFHLINVYAKAYDASTAAQDGGVCIMDKYDLEAKPVKSTV
QQVYDFIQKDIDDAIPHLQEKPNNPYHPSLAFAYALKAKVHLFKREIAEAQAAAEKAMQL
NGQLIDLVQYEKLGGPSKTPIIAENNPEVLSYMYINGYTEMNFGYSYMLSPELTSMFDKE
DKRFSLFYTKTNASFLDIGAGASYYNVKYTAFFFPTVGLKTPEIYLMLAECYARQDQYAK
AISLLNSLRKTRIEGDKAILAVPTTRKEAMDLVINERRRELPIGYHRFFDLKRLNLEKEY
AKTLVRVFPIVNKTVEQKTYTLAPNSRMYIIPFPLDAMKLNPNLRLNTDEAVPF
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgactttaaaaactataatggcggcatgtgcgactctagtagtcttttccgcctgcgat
aaatacctcgacattacaccaaaaggctcccaattggtgcgtaccacacaagactattac
gacttggtggcctaccccaatagaggctaccccgtcaataattttcagtacctggtcgat
gaccaatacctcaaagaatccaatgttatcggtttgacgcccaacatcaataccatcaac
tttttgtttcaggaaaaggaagaccgggtcagtcaactcaactcatcgagcttttacaac
cagtgctacaaatacattgcacagtggaacatgattatttccctggtggatgaaagcccg
ggcgatagccaattgaagaccctggctaaagccgaggccaagatgtttcgagctttcgat
tatttccacctcatcaatgtctacgccaaggcctatgatgccagcacggcagcgcaggac
ggtggtgtctgcatcatggataaatacgacctggaggccaaaccagtcaagtcgacggta
cagcaggtatacgattttattcaaaaagatattgacgacgccataccccatctgcaagag
aaacccaacaatccctatcacccatcgctggcctttgcttatgcattgaaagccaaggtg
caccttttcaaaagggagattgccgaagcacaggcggcagccgaaaaagccatgcagctg
aatggacagctcattgatctggtacaatatgaaaaattgggcggaccaagcaagacaccg
atcatcgccgaaaataatcccgaagtattgagctacatgtatatcaatggctacaccgaa
atgaactttgggtacagctacatgttaagtcccgaactgacgagcatgttcgataaagaa
gacaagcgttttagtttattctacaccaagaccaacgccagcttcctggatatcggcgcc
ggagcaagttactacaacgtcaagtataccgcatttttcttccccaccgttggactaaaa
acaccggaaatttacctgatgctggccgaatgttatgcccgtcaagatcaatatgccaaa
gccatcagcctattgaatagtctacgcaaaacccgcattgaaggcgacaaggccattctg
gccgttccgacgacacgcaaggaagcgatggatctggttattaacgagcgccgtcgcgag
ctgccgatcggataccaccgtttctttgatctgaaacgcttaaatctcgaaaaagaatat
gccaaaacactcgtccgtgtcttcccgattgtcaataagacggtcgagcaaaagacctat
acactggcgccaaactccagaatgtacatcattccgtttccattggacgccatgaagtta
aacccaaacttacggttaaatacagacgaagccgtaccgttttaa
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