Sphingobacterium sp. R2: VXM68_06715
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Entry
VXM68_06715 CDS
T10631
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00521
Streptomycin biosynthesis
sprz00523
Polyketide sugar unit biosynthesis
sprz00525
Acarbose and validamycin biosynthesis
sprz00541
Biosynthesis of various nucleotide sugars
sprz01100
Metabolic pathways
sprz01110
Biosynthesis of secondary metabolites
sprz01250
Biosynthesis of nucleotide sugars
Module
sprz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VXM68_06715 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VXM68_06715 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
VXM68_06715 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VXM68_06715 (rfbB)
00525 Acarbose and validamycin biosynthesis
VXM68_06715 (rfbB)
Enzymes [BR:
sprz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
VXM68_06715 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NmrA
KR
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
XCY06644
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Position
1616585..1617640
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AA seq
351 aa
AA seq
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MNKTVLITGGAGFIGSHVVREFVLKYPEYQIINLDALTYAGNLENLKDIEHLPNYTFLKA
DITDQQLIVDVFQKYQPNGVIHLAAESHVDRSIVDPTAFVMTNVIGTVNLLNAANAIWKD
NFEGKRFHHVSTDEVFGALGDTGFFTEETKYDPHSPYSASKASSDHFVRAYHDTYGLPIV
LTNCSNNYGPNHFPEKLIPLCIHNILNNKPLPVYGDGKYTRDWLYVIDHAKAIDLVFHEG
KNGDSYNVGGFNEWQNIDLIKELCKQMDEKLGREQDSSMQLITFVKDRPGHDLRYAIDAT
KINKELGWYPSVTFEEGLSRTIDWFLSNQEWLEHVTSGDYKKYYDNQYKGA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagttttaattaccgggggagccggatttataggttcacatgttgtgcgt
gagtttgtgctgaagtatccagaatatcaaattatcaatctggatgcattgacctatgcc
ggcaatctcgagaatttaaaagatatcgagcacttaccaaattatacttttcttaaagca
gatattacagatcagcagctcattgtggatgtttttcaaaaatatcagccaaatggagtt
atccatctggcagccgagtctcatgttgaccgttcgattgttgatcctacagctttcgtg
atgaccaacgtgattggaactgtcaatttattgaatgcagccaatgcaatttggaaggat
aattttgaagggaagcgttttcatcacgtatctaccgatgaggtatttggtgcgcttggc
gatacgggattttttactgaagagacaaaatatgatcctcattcaccttattccgcttct
aaggcaagttcggatcattttgtccgggcttatcatgatacctacggcttacctattgtt
ttaacaaactgttcaaacaattatggacctaatcattttcctgagaaattgattccgctt
tgcattcataatattttaaataataagcctctcccggtttatggcgatggaaaatatacc
cgcgattggttatatgtaattgatcacgcaaaagctatagatctcgtttttcatgagggt
aaaaatggtgactcatataacgtcggtggattcaatgagtggcaaaatatagatctgatc
aaagagctatgtaaacaaatggacgagaaactgggacgtgaacaagactcttcgatgcaa
ttaattacttttgttaaagatcgtcccggacatgatttgcgttatgcaattgatgcaacc
aagatcaataaggaattgggatggtatccttcagttacttttgaagaaggcttgtcgcgg
acgatagattggttcttgtctaatcaggaatggctggagcatgtgacatcgggcgattat
aaaaaatattacgacaatcaatacaaaggcgcataa
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