Sphingobacterium sp. R2: VXM68_07145
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Entry
VXM68_07145 CDS
T10631
Name
(GenBank) bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00061
Fatty acid biosynthesis
sprz00540
Lipopolysaccharide biosynthesis
sprz01100
Metabolic pathways
sprz01212
Fatty acid metabolism
Module
sprz_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VXM68_07145
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
VXM68_07145
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sprz01005
]
VXM68_07145
01004 Lipid biosynthesis proteins [BR:
sprz01004
]
VXM68_07145
Enzymes [BR:
sprz01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
VXM68_07145
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
VXM68_07145
Lipopolysaccharide biosynthesis proteins [BR:
sprz01005
]
Lipid A
VXM68_07145
Lipid biosynthesis proteins [BR:
sprz01004
]
Fatty acid synthase
Component type
VXM68_07145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
Motif
Other DBs
NCBI-ProteinID:
XCY07490
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Position
1740087..1741487
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AA seq
466 aa
AA seq
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MNVKQRTIKNEVEISGVGLHTGKIVSMTIKPAPENHWFKFRRVDLEGQPEILVDADNVTD
TSRGTTITQNGASVSTIEHLMASLIGLQIDNVLIDIDGPEIPILDGSSAIFVKLLEEAGF
EEQDADRDYYEISNNIHYAEPDRKVEILGMPMDGYRMTCMIDFNSPVLGSQHAAITSIDD
FKSEISSSRTFCFLHELEMLVDHGLIKGGDLSNAIVIVDKETSPEELQKLAHLFHKETVA
VAKEGILNNNQLRYQNEPARHKLLDMVGDLALVGRPLKGHIMAARPGHAANVAFAKKIKE
QIKKDKTRKKIKVYDPNMPALYDTVEIMKILPHRQPMLMVDKILELTETHVVGLKNVTMN
EDLFMGHFPGAPLFPGVLQVEAMAQTGGILVLKTVPDPENWLTLFLKIENARFKAQVTPG
DSVIFRCDLMEPIRRGIAKMKGVAMVGEKIVCEAELMAQIVRVNNN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaaaacagcgaaccatcaaaaacgaggttgagatttcgggggtaggtcttcat
acagggaaaattgtgtcgatgaccatcaaaccagctccggaaaatcactggtttaagttc
aggcgtgtagacttggaggggcagccagaaattttggttgatgcagataacgtgacggac
acttcgagggggacgacaattactcagaacggtgcaagtgtaagtacaattgaacatttg
atggcgtcgttaattggtttacaaattgataacgtcctgattgatatcgatggtcccgag
atacctatcttagatggaagttcagctatttttgtaaagctgcttgaagaggcaggcttt
gaggagcaggatgctgacagagattattatgagatttccaataatatccattatgctgag
cctgatcgaaaagtcgagatattgggtatgccgatggatggctataggatgacctgcatg
atcgattttaactcgccggtgttgggaagccagcatgctgcgattacgtcaattgacgat
tttaaatccgaaatttcatcttcacgtaccttttgctttttgcatgagttagagatgttg
gtggatcatgggcttattaaaggtggtgacctaagtaatgccattgttattgtggataag
gagacttcgcctgaagaattacagaaattagctcatctttttcataaggaaaccgttgca
gttgccaaagaaggaatattaaacaataatcaattgcgctaccaaaatgaacctgcccga
cataaattgttggatatggttggagatttggcactcgttgggcgaccgctgaagggccat
attatggctgctcggccggggcatgccgccaatgttgcctttgcgaaaaaaataaaggag
cagattaagaaagataaaacacgtaaaaaaattaaagtttacgatcctaatatgccagca
ttatacgatacggtagaaattatgaagattttgccgcatcgtcagcctatgcttatggtg
gataagattcttgaattgaccgaaacacatgttgtaggcttgaagaatgttaccatgaac
gaagatttatttatgggacattttcccggggcgccattatttccaggtgtattgcaagta
gaggctatggcgcaaacaggtgggattttggttcttaaaacagttcctgatccggaaaat
tggctaactttatttctgaaaattgaaaatgcccgttttaaagcgcaggtaactccagga
gattctgttatttttagatgcgatttgatggagccgattcgaagaggtatcgcaaaaatg
aaaggtgtggccatggtaggggagaagatcgtatgtgaagccgagcttatggctcagatc
gtaagagtaaataacaactaa
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