Sphingobacterium sp. R2: VXM68_07275
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Entry
VXM68_07275 CDS
T10631
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
sprz Sphingobacterium sp. R2
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_50
HTH_11
HTH_28
Mga
HTH_23
HTH_29
Mg_chelatase
EF-hand_14
HTH_1
HTH_17
HTH_30
Motif
Other DBs
NCBI-ProteinID:
XCY06747
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Position
1768389..1769660
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AA seq
423 aa
AA seq
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MDNQDIKNRFGIIGNSPLLNRAIDIARQVAPTDISVLIQGESGSGKEVFSHIIHQLSSRK
HGPFIAVNCGAIPEGTIDSELFGHEKGSFTGAHEARKGYFEVVDGGTIFLDEVGELPLGT
QARLLRVLESGEYIRVGSSKVQKTNVRVVAATNVNVFEAVQKGRFREDLYYRLNTVPLRV
PSLRERPEDVNLLFRKFIVDFSEKYRTPGVQLTDDAQNMLRNYSWPGNVRQLKNVAEQIA
VLEKERVVDAYTLQNYLPNESRTSLPAVVPSNNGGKEDFSERDLLYKVLFDMKKDMVDLK
KLVVELIQKGVDSSTFDQNSPYINQLYQEIEPHLKSEPENYTTPTLTIHSPSNAANVLKN
PVSKDDYLQDAEEVEESLSLVDKESDLIKKALKKHRGKRKAAAQELGISERTLYRKIKDL
NLD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggataaccaagatataaagaatagatttgggattatcggtaattcgccattgttgaat
cgggcaattgatattgcgcgacaagtggctccgacagatatttccgtattaatacaaggt
gagagtggtagtggtaaagaagttttttcgcatattatccatcaattgagttcacgtaag
catggcccctttattgcggtcaactgtggggctataccagaaggaaccattgactccgag
ttatttggtcacgaaaaaggttcttttacgggagcacatgaagctagaaagggctatttt
gaagtcgttgacggtggtacgatttttttagatgaggttggtgagttacctttagggaca
caagcacgattgttacgtgtgctggagtctggagagtatataagggtcggatcatccaaa
gtgcagaaaacaaatgttcgtgtcgttgccgctacaaatgtgaatgtttttgaagctgta
caaaagggtagatttcgcgaagatctttattatcgtttaaatactgtacccttgcgtgtg
ccctctttacgtgagcgtcctgaagatgttaacttattattccgtaagtttatcgtggac
ttttctgaaaagtaccgtactcctggtgttcaattgacggacgatgctcagaatatgcta
cgcaactatagttggcctggaaatgtgcgtcaactgaaaaatgttgccgaacaaattgct
gttctggagaaagaacgtgttgtagatgcgtatacgcttcaaaattatttgcccaatgaa
tcccgaacgagtctccctgcagtagttccatcaaataatggggggaaggaggatttttca
gaaagagatttgctgtataaagttttatttgatatgaagaaagatatggttgatctgaaa
aaactggtggttgaattaattcagaagggcgttgattctagcacgtttgatcaaaattct
ccatacattaatcaattgtatcaagagattgagccacatttgaaatcggagccggaaaat
tatacaacaccgactttgacgatacattcgccatcaaatgctgcaaatgtattaaaaaat
cctgtttcaaaggatgactatctgcaggatgcagaagaggtagaggaatctttatctctt
gttgataaggaatctgatttaatcaagaaggcattaaaaaagcaccgtggtaagcgtaaa
gctgccgcacaagagttggggatttctgaaagaactttgtatagaaagattaaagactta
aatttagattag
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