Sphingobacterium sp. R2: VXM68_07570
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Entry
VXM68_07570 CDS
T10631
Symbol
hisS
Name
(GenBank) histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
VXM68_07570 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sprz01007
]
VXM68_07570 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sprz03016
]
VXM68_07570 (hisS)
Enzymes [BR:
sprz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
VXM68_07570 (hisS)
Amino acid related enzymes [BR:
sprz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
VXM68_07570 (hisS)
Transfer RNA biogenesis [BR:
sprz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
VXM68_07570 (hisS)
Prokaryotic type
VXM68_07570 (hisS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2d
tRNA-synt_2
Motif
Other DBs
NCBI-ProteinID:
XCY06805
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All DBs
Position
1838191..1839573
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AA seq
460 aa
AA seq
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MAVVKPSLAKGTRDFSPSEMIKRNYIFDTLKTVFRKYGYSEIQTPSFENLTTLTGKYGDE
GDKLIFKILNSGDYMAKAPDSLLQDKNSNKLIPHISEKALRYDLTVPFARYVVMHQNDIA
LPFKRFQVQPVWRADRPQRGRYREFYQCDVDVVGSESLLNEAEFILIYQEAFERFGLKDF
AIKINNRKILSGIAEIIGKPELIVDMTVAIDKLDKIGLDGVNKELLERGFTEADLAILKP
IILLEGSNEEKISSLKMILATSAVGLNGIAEIEEVFDYVGKLGAEEKLLNQIIDLDITLA
RGLNYYTGCIFEVKTNEVAMGSIGGGGRYDDLTGMFGLKGLTGVGVSFGADRIYDVLEEL
NLFPTGKAETTKLLIINFDKQLEVYTLRLLNKLRQENIASELYATPVKLKKQMGYADGKG
IPYVLLVGEEEAASGQLSLKDMESGEQIKVTESELIQKLR
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtaaaaccttctttggcaaaaggaacgcgtgatttttcgccttccgaaatg
atcaaacgcaactatattttcgatacactgaaaacggtattcagaaaatatggctatagt
gaaatacaaaccccttcatttgaaaatttaaccacgcttaccggtaaatatggcgatgag
ggtgataagctgatctttaagattcttaattcgggtgattacatggcaaaagcgccagac
agcctgcttcaagataaaaattccaataaactcattccacatatttcagagaaagcgcta
agatatgaccttactgtgcctttcgcacgttacgtcgtaatgcaccagaatgatattgct
ttaccatttaagcgttttcaagtacaacccgtatggcgtgctgatcgtccgcagcgcgga
agatatcgtgagttttatcaatgtgatgtggatgtggttggatctgaaagtttactgaat
gaagcggagttcattctgatttatcaagaggccttcgagcgttttggactgaaagatttt
gcgattaaaatcaacaaccggaaaattctctcaggtattgccgaaattatcggaaagccg
gagttgattgtcgatatgacggtagcgatcgacaaattggataaaatcggcttggatggt
gtcaacaaagaattgcttgagcgaggctttactgaagcggatcttgctattttgaaacct
atcattttattggaaggctcgaatgaagagaaaatttcttccttaaaaatgattttagcc
acttctgctgtcggtttgaatggtattgcggagattgaggaagtgtttgactatgttggc
aaattaggtgcagaagaaaaattgctgaatcaaatcatagacttggacataacattggct
cgtggtctaaattattacacgggctgtatttttgaggtcaagaccaatgaggttgcgatg
ggaagcatcggtggcggcggtcgttacgatgatctcacagggatgtttggactgaagggg
ttgaccggagttggagtttcttttggtgctgaccgaatttatgatgtactcgaagaattg
aatctttttccaactggtaaagccgaaaccacaaaacttcttattattaattttgataag
caactcgaagtgtatacacttcgcttactaaacaaacttcgtcaagaaaatattgcttcg
gaactttatgctactcctgtcaaattgaaaaagcaaatggggtatgcggatggaaaagga
attccctatgtgttattggtaggggaagaagaggctgcttcggggcaattgtctttaaaa
gacatggaaagtggtgagcaaataaaggttactgaaagtgagctgatccaaaaacttcga
taa
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