Sphingobacterium sp. R2: VXM68_08970
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Entry
VXM68_08970 CDS
T10631
Symbol
recF
Name
(GenBank) DNA replication and repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
sprz Sphingobacterium sp. R2
Pathway
sprz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sprz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VXM68_08970 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sprz03400
]
VXM68_08970 (recF)
DNA repair and recombination proteins [BR:
sprz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
VXM68_08970 (recF)
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Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_29
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
XCY07065
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Position
2158154..2159257
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AA seq
367 aa
AA seq
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MWLKQLSVLNFKNYAESSLEFLPEVNAFTGDNGVGKTNLLDAIHYLSLCKSYFNPIDSQH
IKSGNDWFMVQGEFNKESTSDFISCSLKKNQKKQFKKNKKDYPRLADHIGLFPLVMISPN
DSIIVTDGSEERRKFVDNVISQTDNKYLDTLIIYNKFLAQRNSLLKQARQTSVLDLGLIE
ILNFQLEEVGNIIFQKRRSFMEEFQPEFDRHYQFLTDDAESVQLHYESPLMTDSFLRILE
KNLERDRMLERTTQGIHKDDLIFTIHGGMPLKKFGSQGQQKSFLIALKLAQYSYLQHKKG
FKPLLLLDDIFDKLDDRRTHKLMQMVSEDDFGQIFLTDTDSKRIERIFEEINRPVRIFDI
VGGQVNV
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtggctcaagcaactttctgttctaaatttcaaaaattacgcggaatcatctttggaa
ttccttcctgaggtaaatgcatttacaggtgataatggggttggaaaaacgaatcttttg
gatgcgattcattatttatccctttgtaaaagttatttcaatccgatcgattcacagcac
atcaagtcaggtaacgactggtttatggtacagggagagtttaataaggaatcaaccagt
gattttatatcttgtagcctaaaaaaaaatcaaaagaagcagtttaaaaaaaacaagaag
gattatcctagattggctgatcatatcggtttgtttcctttggtgatgatttccccaaac
gatagtatcatcgtcacagatgggagtgaagaacgtagaaagtttgtggataatgtaatt
tcccaaacagacaataaatatttagatacgctgattatttataataagtttttagctcaa
cgtaacagccttcttaaacaagcgcgtcaaactagtgtacttgatcttggactaattgaa
attcttaattttcaacttgaagaagttggaaatattatttttcaaaaaagaagatccttt
atggaggagtttcagcctgagtttgaccgacattatcagttcctcactgacgacgcggag
tccgtacaattgcactatgaatcgcctttaatgactgattcttttttacgtattttggag
aagaacttggagcgtgaccgtatgttagaacgtaccacgcagggtatacataaggatgat
ctaatatttacaattcacggtggaatgcctttgaaaaaatttggttctcaagggcaacaa
aaatcttttttaattgcgctaaaacttgctcaatattcttatttgcaacataaaaagggt
tttaagcctctgcttcttttggatgatatcttcgataaactagatgatcgtagaacacac
aaattgatgcaaatggtttccgaagatgattttggacagattttcctaaccgatacagat
tcaaaaagaattgagcgaatatttgaggaaatcaaccgtcctgttcgtatatttgatatt
gtaggaggacaagtcaatgtataa
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